`
`Open up 3D Slicer
`Open up 3D Slicer
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`Slicer4 Minute Tutorial: Viewing the Scene
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`
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`Open the directory dataset2_Head located in
`C:/3DSlicerData_RSNA2014/3DVisualizationDICOM_Tuesday_Dec3
`Drag and drop the file Head_Scene.mrb into Slicer
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`Slicer4 Minute Tutorial: Viewing the Scene
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` Click on OK to load the file MRHead_Scene.mrb into Slicer
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`Slicer4 Minute Tutorial: Viewing the Scene
`
`3D Viewer
`
`When the scene is finished
`loading, Slicer displays:
`• a 3D model of the head in
`the 3D Viewer, and
`• anatomical MR slices of
`the brain in the 2D Slice
`Viewers.
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`Slicer4 Minute Tutorial:
`
`functionality
`Exploring Slicer’s
`
`To access the Models
`module click on
`Welcome to Slicer.
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`Slicer4 Minute Tutorial: Switching to the Models Module
`
`
`
`
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`Slicer displays the GUI of
`the Models Module
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`Slicer4 Minute Tutorial: Basic 3D Interaction
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`Left-click & drag
`
`Position the mouse in
`the 3D Viewer.
`
`Hold down the left
`mouse button and drag
`to rotate the model.
`
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`Slicer4 Minute Tutorial: Viewing Slices in the 3D Viewer
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`Click on the Slice Visibility
`Icon to display the Axial Slice in
`the 3D Viewer
`
`
`
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`S
`licer4 Minute Tutorial: 3D Visualization
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`Slicer adds a view of
`the Axial slice in the
`3D View.
`
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`Slicer4 Minute Tutorial: Viewing Slices in the 3D Viewer
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`Click on the layout menu in the
`toolbar, and select the
`Conventional layout
`
`
`
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`Slicer4 Minute Tutorial: 3D Visualization
`
`Select the Skin.vtk
`Change the opacity of the model
`from 1.0 to 0.0.
`
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`The model of the skin becomes
`invisible in the 3D viewer and the
`model of the skull bone and
`eyeballs become visible.
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`Slicer4 Minute Tutorial: 3D Visualization
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`Click on the Slice Visibility icon
`"
`in the Green Slice Viewer to display
`the Coronal Slice in the 3D Viewer.
`
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`Slicer4 Minute Tutorial: 3D Visualization
`Select the 3D model skull_bone.vtk
`in the Model Hierarchy and turn on
`the Clipping option.
`
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`Slicer4 Minute Tutorial: 3D Visualization
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`Browse through the coronal
`slices to expose the 3D model
`of the white matter, and the
`left and right optic nerves.
`
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`Slicer4 Minute Tutorial: 3D Visualization
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`Now make the skull invisible
`
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`Slicer4 Minute Tutorial: 3D Visualization
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`Scroll the Coronal Slices to
`display the hemispheric white
`matter model in the context of
`the image data in the 3D.
`
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`Slicer4 Minute Tutorial: 3D Visualization
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`Select the hemispheric white matter
`model called
`hemispheric_white_matter.vtk
`Turn off its visibility.
`
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`Slicer4 Minute Tutorial: 3D Visualization
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`Slicer displays the optic nerve,
`optic chiasm and optic tracts
`overlaid on the MR images of
`the brain.
`
`©2012-2014 Surgical Planning Laboratory, ARR Slide 80
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`Slicer4 Minute Tutorial: 3D Visualization: Zoom the view
`
`Windows/Linux users: Position the
`mouse in the 3D Viewer, hold down
`the right mouse button and move
`the mouse down to zoom in.
`Mac users: Position the mouse in
`the 3D Viewer, hold down the apple
`button and the mouse button and
`move the mouse down to zoom in
`(or use two fingers on the touch
`pad).
`
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`Close the existing scene and all its data
`
`Select File->Close Scene
`This removes any dataset
`previously loaded into slicer.
`
`
`Click on Exit to exit Slicer
`
`©2012-2014 Surgical Planning Laboratory, ARR
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`
`Overview
`Part I: Introduction to the 3DSlicer software
`
`Part II: 3D Data Loading and visualization of DICOM images
`
`
`- Volume Rendering of thoraco-abdominal CT data
`- Surface Rendering of MR head data
`
`Part III: 3D interactive exploration of the anatomy
`- Exploration of the Segments of the liver
`- Exploration of the Segments of the lung
`
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