throbber
Case 1:18-cv-00202-IMK Document 1-1 Filed 10/30/18 Page 1 of 240 PageID #: 16
`Case 1:18-cv-00202-IMK Document 1-1 Filed 10/30/18 Page 1 of 240 PageID #: 16
`
`EXHIBIT A
`EXHIBIT A
`
`
`
`

`

`Case 1:18-cv-00202-IMK Document 1-1 Filed 10/30/18 Page 2 of 240 PageID #: 17
`
`11111111111111111111111111101111M1j111111101111111111
`
`(10) Patent No.: (cid:9)
`(45) Date of Patent: (cid:9)
`
`US 9,549,938 B2
`*Jan. 24, 2017
`
`(12) United States Patent (cid:9)
`Baker et al. (cid:9)
`
`(54)
`
`(71)
`
`(72)
`
`BORON-CONTAINING SMALL MOLECULES
`
`Applicant: Anacor Pharmaceuticals, Inc., Palo
`Alto, CA (US)
`
`Inventors: Stephen J. Baker, Collegeville, PA
`(US); Tsutomu Akama, Sunnyvale, CA
`(US); Vincent S. Hernandez,
`Watsonville, CA (US); Karin M. Hold,
`Belmont, CA (US); Kirk Maples. San
`Jose, CA (US): Jacob J. Plattner,
`Berkeley, CA (US); Virginia Sanders,
`San Francisco, CA (US); Yong-Kang
`Zhang, San Jose, CA (US); Gregory T.
`Fieldson, Morgantown, WV (US);
`James J. Leyden, Malvern, CA (US)
`
`(73)
`
`Assignee: (cid:9) Anacor Pharmaceuticals, Inc., Palo
`Alto, CA (US)
`
`CO7F 5/04 (cid:9)
`CO7H 19/06 (cid:9)
`CO7H 19/16 (cid:9)
`CO7H 21/00 (cid:9)
`CO7H 23/00 (cid:9)
`A6IK 31/70 (cid:9)
`A61K 31/7076 (cid:9)
`A6IK 9/00 (cid:9)
`A6IK 47/10 (cid:9)
`A6IK 9/08 (cid:9)
`U.S. Cl.
`CPC (cid:9)
`
`(52)
`
`(2006.01)
`(2006.01)
`(2006.01)
`(2006.01)
`(2006.01)
`(2006.01)
`(2006.01)
`(2006.01)
`(2006.01)
`(2006.01)
`
` A6IK 31/69 (2013.01); A61K 9/0012
`(2013.01); A61K 9/08 (2013.01); A6IK 31/70
`(2013.01); A61K 31/7076 (2013.01); A6IK
`47/10 (2013.01); CO7F 5/025 (2013.01); CO7F
`5/04 (2013.01); CO7H 19/06 (2013.01); C0711
`19/16 (2013.01); CO7H 21/00 (2013.01);
`CO7H 23/00 (2013.01)
`Field of Classification Search
` 514/64
`USPC (cid:9)
`See application file for complete search history.
`
`( )
`
`Notice: (cid:9)
`
`Subject to any disclaimer, the term of this
`patent is extended or adjusted under 35
`U.S.C. 154(b) by 0 days.
`
`(58)
`
`This patent is subject to a terminal dis-
`claimer.
`
`(56)
`
`References Cited
`
`
`
`
`
`Appl. No.: 15/068,352
`
`Filed: (cid:9)
`
`Mar. 11, 2016
`
`(60)
`
`(65)
`
`Prior Publication Data
`Jun. 30, 2016
`US 2016/0184334 Al (cid:9)
`Related U.S. Application Data
`Continuation of application No. 15/046,322, filed on
`Feb. 17, 2016, which is a continuation of application
`No. 14/537,771, filed on Nov. 10, 2014, which is a
`continuation of application No. 14/201,459, filed on
`Mar. 7, 2014, now Pat. No. 9,353,133, which is a
`continuation of application No. 13/356,488, filed on
`Jan. 23, 2012, now Pat. No. 8,722,917, which is a
`continuation of application No. 12/629,753, filed on
`Dec. 2, 2009, now Pat. No. 8,115,026, which is a
`division of application No. 11/505,591, filed on Aug.
`16, 2006, now Pat. No. 7,767,657, which is a
`continuation-in-part of application No. 11/357,687,
`filed on Feb. 16, 2006, now Pat. No. 7,582,621,
`application No. 15/068,352, filed on Mar. 11, 2016,
`which is a continuation-in-part of application No.
`13/874,329, filed on Apr. 30, 2013, now Pat. No.
`8,889,656, which is a continuation of application No.
`13/224,252, filed on Sep. 1, 2011, now Pat. No.
`8,440,642, which is a continuation of application No.
`12/507,010, filed on Jul. 21, 2009, now Pat. No.
`8,039,451, which is a continuation of application No.
`11/357,687.
`(60) Provisional application No. 60/654,060, filed on Feb.
`16, 2005, provisional application No. 60/755,227,
`(Continued)
`
`(51) Int. Cl.
`A6IK 31/69
`CO7F 5/02
`
`(2006.01)
`(2006.01)
`
`U.S. PATENT DOCUMENTS
`
`2,260,336 A
`2,741,548 A
`2.831,866 A
`
`10/1941 Prescott et al.
`4/1956 Darling et al.
`4/1958 Freeman et al.
`(Continued)
`
`FOREIGN PATENT DOCUMENTS
`
`EP
`EP
`
`1/2000
`0969531 (cid:9)
`8/2000
`0765331 81 (cid:9)
`(Continued)
`
`OTHER PUBLICATIONS
`
`U.S. Appl. No. 13/673,860, filed Nov. 9, 2012, Anacor Phamiaceu-
`ticals, Inc.
`
`(Continued)
`
`Primary Examiner— Rei-Tsang Shiao
`(74) Attorney, Agent, or Firm — Morgan, Lewis &
`Bockius LLP
`
`(57) (cid:9)
`
`ABSTRACT
`
`This invention relates to compounds useful for treating
`fungal infections, more specifically topical treatment of
`onychomycosis and/or cutaneous fungal infections. This
`invention is directed to compounds that are active against
`fungi and have properties that allow the compound, when
`placed in contact with a patient, to reach the particular part
`of the skin, nail, hair, claw or hoof infected by the fungus.
`In particular the present compounds have physiochemical
`properties that facilitate penetration of the nail plate.
`
`6 Claims, 63 Drawing Sheets
`
`(cid:9)
`(cid:9)
`(cid:9)
`(cid:9)
`(cid:9)
`(cid:9)
`(cid:9)
`(cid:9)
`(cid:9)
`(cid:9)
`

`

`Case 1:18-cv-00202-IMK Document 1-1 Filed 10/30/18 Page 3 of 240 PageID #: 18
`
`US 9,549,938 B2
`Page 2
`
`Related U.S. Application Data (cid:9)
`
`filed on Dec. 30, 2005, provisional application No. (cid:9)
`60/746,361, filed on May 3, 2006. (cid:9)
`
`(56) (cid:9)
`
`References Cited (cid:9)
`
`U.S. PATENT DOCUMENTS (cid:9)
`
`6/1963 Bell et al. (cid:9)
`3,093,659 A (cid:9)
`9/1963 Emrick et al. (cid:9)
`3,104,255 A (cid:9)
`1/1967 Grier (cid:9)
`3,297,525 A (cid:9)
`2/1968 Wagner et al. (cid:9)
`3,370,957 A (cid:9)
`8/1972 Kohn et al. (cid:9)
`3,686,398 A (cid:9)
`6/1974 Shapiro et al. (cid:9)
`3,816,472 A (cid:9)
`3/1975 Singer
`3,873,279 A (cid:9)
`5/1980 Pfiffner (cid:9)
`4,202.894 A (cid:9)
`7/1986 West etal.
`4,602,011 A (cid:9)
`4,716,035 A 12/1987 Sampathkamar (cid:9)
`8/1988 West et al.
`4,766,113 A (cid:9)
`4/1989 Arita etal. (cid:9)
`4,822.822 A (cid:9)
`1/1990 Nabi etal. (cid:9)
`4,894,220 A (cid:9)
`4/1990 Decicner et al. (cid:9)
`4.919,934 A (cid:9)
`4,977,268 A (cid:9)
`12/1990 McPhail et al. (cid:9)
`11/1993 Bohn et al. (cid:9)
`5,264,206 A (cid:9)
`9/1994 Patel et al. (cid:9)
`5,348,947 A (cid:9)
`9/1994 Patel et al. (cid:9)
`5,348,948 A (cid:9)
`5,498,407 A (cid:9)
`3/1996 Atlas (cid:9)
`1/1997 Kennedy et al. (cid:9)
`5,591,731 A (cid:9)
`9/1997 Stolowitz (cid:9)
`5,668,258 A (cid:9)
`11/1997 Stolowitz (cid:9)
`5,688,928 A (cid:9)
`11/1998 Stolowitz et al. (cid:9)
`5,831,045 A (cid:9)
`3/1999 Austin et al. (cid:9)
`5,880,188 A (cid:9)
`10/1999 Driedger eta'. (cid:9)
`5,962.498 A (cid:9)
`6,042,845 A (cid:9)
`3/2000 Sun et al. (cid:9)
`6/2000 Murugesan et al. (cid:9)
`6,080,774 A (cid:9)
`7/2000 Adams etal. (cid:9)
`6,083,903 A (cid:9)
`6,143,794 A (cid:9)
`11/2000 Chaudhuri eta'. (cid:9)
`6,221,640 B1 (cid:9)
`4/2001 Tao et al. (cid:9)
`5/2001 Samour et al. (cid:9)
`6,224,887 B1 (cid:9)
`10/2001 Rothschild et al. (cid:9)
`6,306,628 B1 (cid:9)
`4/2002 Pershadsingh et al. (cid:9)
`6,369,098 B1 (cid:9)
`2/2003 Link et al. (cid:9)
`6,521,619 B2 (cid:9)
`3/2004 Babu et al. (cid:9)
`6,699,994 B1 (cid:9)
`10/2004 Cox et al. (cid:9)
`6.800,645 B1 (cid:9)
`2/2005 Scherer et al. (cid:9)
`6.855,848 B2 (cid:9)
`7,074,392 131 (cid:9)
`7/2006 Friedman eta'. (cid:9)
`1/2007 Hedley et al. (cid:9)
`7,169,603 82 (cid:9)
`4/2007 Shibasaki et al. (cid:9)
`7,205,425 B2 (cid:9)
`5/2007 Mikoshiba et al. (cid:9)
`7,217,701 B2 (cid:9)
`6/2008 Lee etal. (cid:9)
`7.390,806 B2 (cid:9)
`7,446,236 B2 11/2008 Naud et al. (cid:9)
`7,465,836 82 12/2008 Lee et al. (cid:9)
`7,582,621 B2* 9/2009 Baker (cid:9)
`
`8/2010 Baker et al. (cid:9)
`7,767,657 B2 (cid:9)
`7,816,344 82 10/2010 Baker et al. (cid:9)
`8.039,450 B2 10/2011 Akarna et al. (cid:9)
`10/2011 Baker eta'. (cid:9)
`8,039,451 B2 (cid:9)
`2/2012 Baker et al. (cid:9)
`8.115,026 B2 (cid:9)
`5/2012 Baker et al. (cid:9)
`8,168,614 82 (cid:9)
`8,440,642 82 (cid:9)
`5/2013 Baker et al. (cid:9)
`8,722,917 B2 (cid:9)
`5/2014 Baker et al. (cid:9)
`8,889,656 B2" 11/2014 Baker
`
`2002/0010332 Al
`2002/0028831 Al
`2002/0161230 Al
`2002/0165121 Al
`2002/0193672 Al
`2003/0032673 Al
`2003/0181766 Al
`2004/0077601 Al
`2004/0224923 Al
`2004/0259833 Al
`2004/0259842 Al
`2005/0054644 Al
`2005/0125852 Al
`2006/0009386 Al
`
`1/2002 Vollmuller et al.
`3/2002 Manley
`10/2002 Meudt et al.
`11/2002 Brehove
`12/2002 Walsh et al.
`2/2003 Nagy
`9/2003 Satoh et al.
`4/2004 Adams et al.
`11/2004 Lee eta'.
`12/2004 Benkovic et al.
`12/2004 Mikoshiba et al.
`3/2005 Lee et al.
`6/2005 Caenepeel et al.
`1/2006 Stossel et al.
`
` C07F 5/02 (cid:9)
`514/64 (cid:9)
`
` CO7F 5/02 (cid:9)
`514/64 (cid:9)
`
`2006/0222671 Al 10/2006 Weidner
`2006/0234981 Al (cid:9)
`10/2006 Baker et al.
`2007/0155699 Al (cid:9)
`7/2007 Baker et al.
`2007/0286822 Al (cid:9)
`12/2007 Sanders etal.
`2007/0293457 Al (cid:9)
`12/2007 Baker et al.
`2009/0227541 Al (cid:9)
`9/2009 Baker et al.
`2/2010 Kim et al.
`2010/0048570 Al (cid:9)
`2010/0256092 Al 10/2010 Xia et al.
`3/2013 Baker et al.
`2013/0059802 Al (cid:9)
`2013/0059803 Al (cid:9)
`3/2013 Baker et al.
`2013/0064783 Al (cid:9)
`3/2013 Baker et al.
`2013/0210770 Al (cid:9)
`8/2013 Baker et al.
`2014/0142064 Al (cid:9)
`5/2014 Baker et al.
`2014/0221631 Al (cid:9)
`8/2014 Baker et al.
`2015/0065459 Al (cid:9)
`3/2015 Baker et al.
`4/2015 Baker et al.
`2015/0119364 Al (cid:9)
`
`FOREIGN PATENT DOCUMENTS
`
`11/2001
`1155698 Al (cid:9)
`EP (cid:9)
`8/2004
`1 444 981 Al (cid:9)
`EP (cid:9)
`2/2002
`2002-53583 A (cid:9)
`JP (cid:9)
`3/2002
`2002-508359 A (cid:9)
`JP (cid:9)
`7/2003
`2003-212837 A (cid:9)
`JP (cid:9)
`5/2004
`2004-514669 A (cid:9)
`JP (cid:9)
`1/2005
`2005-022986 A (cid:9)
`JP (cid:9)
`5/1995
`WO 9533754 (cid:9)
`WO (cid:9)
`7/1996
`WO 9622023 Al (cid:9)
`WO (cid:9)
`WO (cid:9)
`3/1998
`WO 9812206 Al (cid:9)
`5/2000
`WO 0027822 (cid:9)
`WO (cid:9)
`8/2000
`WO 0044387 Al (cid:9)
`WO (cid:9)
`WO (cid:9)
`WO 0075142 A2 12/2000
`WO (cid:9)
`WO 0114578 Al (cid:9)
`3/2001
`WO 0149303 Al (cid:9)
`7/2001
`WO (cid:9)
`WO 0187846 A2 11/2001
`WO (cid:9)
`WO 0244184 (cid:9)
`6/2002
`WO (cid:9)
`WO 03/009689 Al (cid:9)
`2/2003
`WO (cid:9)
`WO 03033002 Al (cid:9)
`4/2003
`WO (cid:9)
`WO (cid:9)
`WO 03059916 A2 (cid:9)
`7/2003
`WO 2004/043925 A2 (cid:9)
`5/2004
`WO (cid:9)
`WO 2004056322 A2 (cid:9)
`7/2004
`WO (cid:9)
`WO 2004081008 Al (cid:9)
`9/2004
`WO (cid:9)
`WO 2005002577 Al (cid:9)
`1/2005
`WO (cid:9)
`WO (cid:9)
`WO 2005013892 Al (cid:9)
`2/2005
`WO 2005/066172 (cid:9)
`7/2005
`WO (cid:9)
`WO (cid:9) WO 2005/110410 A2 11/2005
`WO (cid:9)
`WO 2005/123054 (cid:9)
`12/2005
`WO (cid:9)
`WO 2005123094 A2 12/2005
`WO (cid:9)
`WO 2006007384 (cid:9)
`1/2006
`WO (cid:9)
`WO 2006062731 Al (cid:9)
`6/2006
`WO (cid:9)
`WO 2006079843 Al (cid:9)
`8/2006
`WO (cid:9)
`WO 2006089067 A2 (cid:9)
`8/2006
`WO (cid:9)
`WO 2006096131 Al (cid:9)
`9/2006
`WO (cid:9)
`WO 2007022437 A2 (cid:9)
`2/2007
`WO (cid:9)
`WO 2007078340 A2 (cid:9)
`7/2007
`WO (cid:9)
`WO 2007095638 A2 (cid:9)
`8/2007
`WO (cid:9)
`WO 2007146965 A2 12/2007
`WO (cid:9)
`WO 2008157726 Al (cid:9)
`12/2008
`WO (cid:9)
`WO 2009111676 A2 (cid:9)
`9/2009
`WO (cid:9)
`WO 2009140309 A2 11/2009
`WO (cid:9)
`WO 2010028005 Al (cid:9)
`3/2010
`WO (cid:9)
`WO 2010045503 A (cid:9)
`4/2010
`WO 2010045505 Al (cid:9)
`WO (cid:9)
`4/2010
`WO (cid:9)
`WO 2015/171186 (cid:9)
`11/2015
`
`OTHER PUBLICATIONS
`
`U.S. Appl. No. 14/977,052, filed Dec. 21, 2015, Anacor Pharma-
`ceuticals, Inc.
`Adamczyk-Wozniac, et al., "Benzoxaboroles—Old Compounds
`with new applications", Journal of Organometalic Chemistry
`694;3533-3541 (2009).
`Alcama, et al., "Discovery and structure-activity study of novel
`benzoxaborole anti-inflanunatory agent (AN2728) for the potential
`topical treatment of psoriasis and atopic dematitis", Bioorganic &
`Medicinal Chemistry Letters, (2009) 19: 2129-2132.
`
`(cid:9)
`(cid:9)
`(cid:9)
`(cid:9)
`

`

`Case 1:18-cv-00202-IMK Document 1-1 Filed 10/30/18 Page 4 of 240 PageID #: 19
`
`US 9,549,938 B2
`Page 3
`
`(56) (cid:9)
`
`References Cited
`
`OTHER PUBLICATIONS
`
`Alexander, et al., "Imprinted Polymers as Protecting Groups for
`Regioselective Modification of Polyfunctional Substrates", J. Am.
`Chem. Soc. 1999, 121, 6640-6651.
`Alley, et al., "Recent Progress on Topical Therapy of
`Onychomycosis", Expert Opinion Investigate Diugs(Feb. 2007)
`16(2): 157-67.
`Austin, et al., "Oxaboroles and Salts and their Use of Biocides for
`Plastics", CAS, vol. 124, pp. 234-024, (1996).
`Bailey, et al., "Boron-Containing Antibacterial Agents: Effects on
`Growth and Morphology of Bacteria Under Various Culture Con-
`ditions," Antimicrobial Agents and Chemotherapy, 17(04):549-553,
`(Apr. 1980).
`Baker, et al., "Discovery of New Boron-Containing Antifungal
`1-benzoxaborole
`5-F luoro -1.3 -di hydro-l-hydroxy-2, (cid:9)
`Agent, (cid:9)
`(AN2690) for Potential Treatment of Onychomoycosis", Journal of
`Medicinal Chemistry, vol. 49, No. 15; pp. 4447-4450, (Jul. 27,
`2006).
`Baker, et al., "Identification of a Novel Boron-Containing Antibac-
`terial Agent (AN0128) with Anti-inflammatory activity, for the
`Potential Treatment of Cutaneous Diseases", Bioorganic & Medici-
`nal Chemistry Letters (2006) 16: 5963-5937.
`Baker, et al., "Progress on New Therapeutics for Fungal Nail
`Infections", Annual Reports in Medicinal Chemistry, vol. 40: pp.
`323-335, (2005).
`Bell, et al., "Design, synthesis and evaluation of a novel series of
`spiroketals based on the structure of the antibacterial gyrase inhibi-
`tor novobiocin", J. Chem. Soc., Perkin Trans., 1997 vol. 18, No. 1,
`pp. 2789-2801.
`Bessis, N., "Gene Therapy for Rheumatoid Arthritis," J. Gene Med,
`vol. 4; pp. 581-591 (2002).
`Brown, et al., "Chiral Synthesis via Organoboranes. 35. Simple
`Procedures for the Efficient Recycling of the Tetpenyl Chiral
`Auxiliaries and Convenient Isolation of the Homoallylic Alcohols in
`Asymmetric Allyl- and Crotylboration of Aldehydes," J. Org.
`Chem., vol. 57, No. 24; pp. 6608-6614, (1992).
`Cairns, et al., "Derivatives of 1,4-Xylene-2,5-diboronic acid and
`1,4-xylene-2-boronic acid", J. Org. Chem. vol. 29; pp. 2810-2812,
`(1964).
`Chander, et al. "Prevalence of Fungal Corneal Ulcers in Northern
`India", Infections, vol. 22, No. 3; pp. 207-209, (1994).
`Chemical Abstracts Registry No. 159752-29-1, Entered STN Dec.
`23, 1994.
`Chemical Abstracts Registry No. 71889-05-9, Entered STN Nov.
`16, 1984.
`Chemical Abstracts Registry No. 845302-09-2, Entered STN Mar.
`11, 2005.
`Chemical Abstracts Registry No. 849062-11-9, Entered STN Apr.
`22, 2005.
`Chemical Abstracts Registry No. 849062-10-8, Entered STN Apr.
`22, 2005.
`Coalition for Affordable Drugs X LLC, v. Anacor Pharmaceuticals,
`Inc., Case No. IPR2015-01776, U.S. Pat. No. 7,582,621 B2, Deci-
`sion entered: Feb. 23, 2016, Paper No. 24, 16 pages.
`Coalition for Affordable Drugs X LLC, v. Anacor Pharmaceuticals,
`Inc., Case No. IPR2015-01780, U.S. Pat. No. 7,767,657 B2, Deci-
`sion filed: Feb. 23, 2016, Paper No. 24, 28 pages.
`Coalition for Affordable Drugs X LLC, v. Anacor Pharmaceuticals,
`Inc., Case No. IPR2015-01785, U.S. Pat. No. 7,767,657 B2, Deci-
`sion filed: Feb. 23, 2016, Paper No. 24, 26 pages.
`Cody et al. CAS: 142: 168379, 2004.
`Cui, et al., "Organoboron Compounds with an 8-Hydroxyquinolato
`Chelate and Its Derivatives: Substituent Effects on Structures and
`Luminescence," Inorganic Chemistry, vol. 44, No. 03; pp. 601-609,
`(Feb. 7, 2005).
`Cusack, S., et al., "The 2 A Crystal Structure of leucyl-tRNA
`Synthetase and its Complex with a Leucyl-Adenylate Analogue."
`EMBO Journal, vol. 19; pp. 2351-2361, (2000).
`
`Dale, et al., "Substituted Styrenes VII. Syntheses and some Reac-
`tions of the Vinylbenzeneboronic Acids" J. Org. Chem. vol. 27; pp.
`2598-2603, (Jan. 1, 1962).
`Demir et al., "Generation of Aryl Radicals from Arylboronic Acids
`by Manganese(III) Acetate: Synthesis of Biaryls and
`Heterobiaryls", J. Org. Chem. 2003, 68, 578-580.
`Denis, "Pharmacology 1104 Lecture: Drug Classifications & Char-
`acteristics of Antimicrobials" (2003).
`Dian, "International Nomenclature of Organics", China Petro-
`chemical Press, 1st Edition; 50-51 (Jan. 21, 2004).
`Falck, et al., "Bromo-Boronolactonization of Olefins", J. Org.
`Chem. 2001, 66. 7148-7150.
`Farfan, et al., "Through-Bond Modulation on N—B Ring Formation
`Shown by NMR and X-Ray Diffraction Studies of Borate Deriva-
`tives of Pyridyl Alcohols," J. Chem. Soc. Perkin Trans., vol. 2; pp.
`527-532 (1992).
`Ferrer, 'Targeting Arninoacyl-tRNA Synthetases for the Treatment
`of Fungal Infections", Drug News Perbina.tive, vol. 19, No. 6; pp.
`347-348, (JulJAug. 2006).
`Fevig etal. CAS: 137: 125150, 2002.
`Fungicide: Definition from Answer.com, (1998).
`Goodman, et al., "Goodman & Gilman's Manual of Pharmacology
`and Therapeutics" Chapter 40;681-694 (2008).
`Grassberger, et al., "Degradation of 1.2-dihydro-1-hydroxy-2-
`(organosulfony1)2,3,1-benzocliasaborines and -thieno[3,2-d][1 „3]
`diazaborines in Alkaline Aqueous Solutions", Liebigs Armalen Der
`Chernie, vol. 4; pp. 683-688, (1985).
`Guo-Zheng, et al., "Single Site Transarylation of 2,2.-Dimetalized-
`1,1.-Binaphthyl to Aminocloroborates and Synthesis of
`2-Binaphthyl Boron Compounds," Youji Iivaxue/Organic Chemis-
`try, Science Press, vol. 16, No. 02; pp. 139-144, (1996) (English
`Abstract).
`Haynes, et al., "Arylboronic Acids VIII. Reactions of
`boronphthalide" J. Org. Chem. vol. 29, No. 11; pp. 3229-3233,
`(1964).
`Hauck, et al., "Preparation and Anticonvulsant Activity of Some
`Aryldiallcylsuccinimides" Research Lab of Parke Davis Co. (1967).
`He, et al., "Small-Molecule Inhibition of TNF-alpha", Science, vol.
`310, No. 5750; pp. 1022-1025, (Nov. 11, 2005).
`Hui, et al., "In Vitro Penetration of a Novel Oxaborole Antifungal
`(AN2690) into the Human Nail Plate", Journal of Pharmaceutical
`Sciences (2007) 96(10): 2622-2631.
`Ishii:12ra etal. CAS: 141: 388701, 2004.
`Karnikawa, et al., "Stereoselective Synthesis of Both Enantiomers
`of Axially Chiral Biaryls Utilizing Planar Chiral
`Tricarbonyl(arene)chromium Complexes", pp. 1375-1384, J. Org.
`Chem, vol. 61, 1996.
`Lampe, et al., "Synthesis and Protein Kinase Inhibitory Activity of
`Balanol Analogues with Modified Benzophenone Subunits", J.
`Med. Chem., vol. 45(12); pp. 2624-2643, (2002).
`Lee, K., et al., "Molecular Study of the Editing Active Site of
`Escherichia coil Leucyl-tRNA Synthetase: Two Amino Acid Bind-
`ing Site in the Editing Domain", vol. 54; pp. 693-704, (2004).
`Lennarz, et al., "Arylboronic Acids. IV. Reactions of
`Boronophthalide" J. Am. Chem. Soc. vol. 82; pp. 2172-2175,
`(1960).
`Li, et al., "An Improved Protocol for Preparation of 3-Pyridyl- and
`Some Arylboronic Acids", J. Org. Chem., vol. 67; pp. 5394-5397,
`(2002).
`Luan, et al., "Inhibition of Experimental Periodontitis by a topical
`boron-base antimicrobial" J Dent. Res, 87(2):148-152 (2008).
`Koster, et al., "Cyclisierugen von Bor-Stickstoff-Verbindugen in der
`Hietz" Liebigs Ann. Chem., vol. '720; pp. 23-31, (1968).
`Koster, (cid:9)
`et (cid:9)
`al., (cid:9)
`"Boron (cid:9)
`)00CDC.
`Compounds, (cid:9)
`Alkenoxy(diorgany)boranes Substituted at the Alkeonxy Group
`from 2-methylacrolein and triorganylboranes," Justus Liebigs
`Annalen Der Chemie, No. 06; pp. 1116-1134, (1976).
`McMillin, et al., "Systemic Aspects of Psoriasis: An Integrative
`Model Based on Intestinal Etiology", Int. Med. vol. 2, Issue 2/3,
`(1999).
`Mikarni et al. CAS: 122: 314944, 1995.
`
`

`

`Case 1:18-cv-00202-IMK Document 1-1 Filed 10/30/18 Page 5 of 240 PageID #: 20
`
`US 9,549,938 B2
`Page 4
`
`(56) (cid:9)
`
`References Cited
`
`OTHER PUBLICATIONS
`
`Moeder. et al., "Kinetic Analysis of the Asymmetric Amplification
`exhibited by B-chlorodiisopinocampheylborane," Journal of Physi-
`cal Organic Chemistry, vol. 17, No. 4; pp. 317-324, (Apr. 2004).
`Monovich, et al., "Total Synthesis of (--)-Steganone Utilizing a
`Samarium(II) Iodide Promoted 8-Endo Ketyl-Olefin Cyclization",
`J. Am. Chem. Soc. 2000, 122, 52-57.
`Morissette, et al., "High-throughput Crystallization: Polymorphs,
`Salts, Co-Crystals and Solvates of Pharmaceutical Solids",
`Advanced Drug Delivery Reviews, vol. 56; pp. 273-300, (2004).
`Motokazu, et al., "Stereoselective induction of an axial chirality by
`Suzuki cross coupling of tricaronyl (arene) chromium complexes
`with arylboronic acids", J. Chem. Soc., Chem. Commun., 1994, vol.
`pp. 2697-2698.
`Murdan, "Drug Delivery to the Nail Following Topical Applica-
`tion", International Journal of Pharmaceutics, vol. 236: pp. 1-26,
`(2002).
`N. Miyaura, "Product subclass 7: hydroxyboranes", Science of
`Synthesis 2004, 6, 257-300.
`Oshima, et al., "Regiospecific Glycosidation of Unprotected Sugars
`via Arylboronic Activation", J. Am. Chem. Soc. 1999, 121, 2315-
`2316 .
`Patani, et al., "Bioisosterism: A Rational Approach to Drug Design",
`Chem. Rev., vol. 96; pp. 3147-3176 (1996).
`Perola, E., et al., "Successful Virtual Screening of a Chemical
`Database for Farnesltransferase Inhibitor Leads." vol. 43; pp. 401-
`4008, (2000).
`Qin, et al., "Luminescent Organoboron Quinolate Polymers," Jour-
`nal of the American Chemical Society, vol. 126, No. 22; pp.
`7015-7018, (Jun. 9, 2004).
`Qin, Clinical Mycology, Fudan Press, Shanghai Medical University
`Press, pp. 92, 111, 340-341, 365, 437 and 487 (2001) With English
`Translation.
`Rau, et al., "Pd-catalyzed synthesis, characterization and modifica-
`tion of poly(p-phenylene)s bearing butoxymethyl side chains", pp.
`2225-2238, Makromol. Chem. 194, 1993.
`Resnick, et al., "Chemoenzymatic Synthesis of Chiral Boronates for
`the 'H NMR Determination of the Absolute Configuration and
`Enantiomeric Excess of Bacterial and Synthetic cis-Diols", pp.
`3546-3549, J. Org. Chem., 1995, vol. 60.
`Robinson et al. CAS: 132: 43141, 1999.
`Rock, et al.. "An Antifungal Agents Inhibits Aminoacyl-tRNA
`Synthetase by Trapping tRNA in the Editing Site", Science, vol.
`316, No. 5832; pp. 1759-1761, (Jun. 22, 2007).
`Silverman, "The Organic Chemistry of Drug Design and Drug
`Action", 2nd Edition, Northwestern University, Department of
`Chemistry, Evanston, Illinois, Section 2: 29-32 (2004).
`Snyder, et al. "Common Bacteria Whose Susceptibility to Antimi-
`crobials in no longer Predictable" J. Med. Liban, vol. 48 No. 4; pp.
`208-214, (2000).
`Stones et al. CAS: 141: 271084, 2004.
`Sugar, et al., "Comparison of Three Methods of Antifungal Sus-
`ceptibility Testing with the Proposed NCCLS Standard Broth
`Macrodilution Assay: Lack of Effect of Phenol Red" Diagn.
`Microbiol. Infect. Die. vol. 21; pp. 129-133, (1995).
`Tabuchi, et al., "Anticoccidial Activity of some Azacyclo
`Organoborinates," Heterocycles, vol. 60, No. 01; pp. 177-182,
`(2003).
`'Ian, Y-L, et al., "Dilithiation of arenetricarbonylchromium(0) com-
`plexes with enantioselective quench: application to chiral biaryl
`synthesis", Department of Chemestry, London, pp. 3269-3280, vol.
`2001.
`Tatsumi, et al., "Therapeutic Efficacy of Topically applied KP-103
`against Experimental Tinea Uguium in Guinea Pigs in Comparison
`with Amorolfine and Terbinafine", Antimicrobial Agents and Che-
`motherapy, vol. 46, No. 12; pp. 3797-3801 (2002).
`Toporcer, et al., "Preparation and Properties of some
`Tetracoordinate Boron Compounds. The Pseudo-metal Ion Con-
`cept," Inorganic Chemistry, vol. 4, No. 11; pp. 649-1655, (Nov.
`1965).
`
`Torssell, "Zur Kenntnis der Arylborasauren III*, Bromierung der
`Tolyborsauren nach Wohl-Ziegler", Arkiv for Kemi, Band 10 nr 36,
`Sep. 12, 1956.
`Toyota, et al., "Intramolecular C=OB Interactions in o-Boron
`Substituted Benzaldehyde, Acetophenone, and Benzophenone",
`Bull.Chem. Soc. Jpn., 75, 2667-2671 (2002).
`Trujillo, et al., "X-Ray Crystallographic Study of Boroxazolidones,
`Obtained from L-ornithine, L-methionine, Kathie acid and 2,6-
`pyridinedicarboxylic acid", Journal of Organometallic Chemistry,
`vol. 571; pp. 21-29, (1998).
`Tschampel, et al., "Arylboronic Acids. VIi. Some Reactions to
`o-Formybenzeneboronic Acids", J. Org. Chem. vol. 29, No. 8; pp.
`2168-2172, (1964).
`Turner, ct al., Current Pharmaceutical Design, vol. 2; pp. 209-224
`(1996).
`Uemura, et al., "Stereoselective induction of an axial chirality by
`Suzuki cross coupling of tricaronyl (scene) chromium complexes
`with arylboronic acids", J. Chem. Soc., Chem. Commun., 1994, vol.
`23, pp. 2697-2698.
`Vippagunta, "Crystalline Solids", Advanced Drug Delivery
`Reviews, vol. 48; pp. 3-26, (2001).
`Wang, etal. "Synthetic Strategies Based on Aromatic Metalation—
`Cross Coupling Links. A Concise Formal Synthesis of the
`Azaphenanthrene Alkaloid Eupolauramine", pp. 4883-4884, Tetra-
`hedron Letters, vol. 32, No. 37, 1991, Great Britain.
`Wang, et al., "Expression, Purification and Characterization of
`Human cAMP-Specific Phosphodiesterase (PDE4) Subtypes A, B,
`C, and D", Biochemical and Biophysical Research Communica-
`tions, vol. 234; pp. 320-324, (1997).
`Williams, et al., "Foye's Principles of Medicinal Chemistry", 5th
`Edition, 2002, Lippincoot Williams & Wilkins, p. 59.
`Wulff, et al., "On the chemistry of binding sites VII, Enantioselec-
`tive binding using chiral boronic acids", pp. 216-221, Reel. Tray.
`Chim. Pays-Bas 109, 1990.
`Ye, etal., "Convenient and Versatile Syntheis of formyl-substituted
`Benzoxaboroles", Tetrahedron, vol. 65; pp. 8738-8744, (2009).
`Zhdankin, et al.. "Synthesis and Structure of Benzoboroxoles:
`Novel Organboron Heterocycles," Tetrahedron Letters, vol. 40; pp.
`6705-6708, (1999).
`Zhou, et al., "Hemodextrin: a Self-assembled Cyclodextrin-
`Porphyrin Construct That Binds Dioxygen," Biophysical Chemis-
`try, 105:639-648 (2003).
`Zhou, et al., "Structure-activity Studies on a Library of Potent
`Calix[41arene-based PDGF Antagonists that Inhibit PDGF-stimu-
`lated PDGFR Tyrosine Phosphorylation," Org. Biomol. Chem.,
`4:2376-2386 (2006).
`Zhou, et M., "Pattern Recognition of Proteins Based on an Array of
`Functionalized Porphyrins," J. Am. Chem. Soc., 128:2421-2425
`(2006).
`Zthing, et al., "Synthesis of Aromatic Nitrogen-containing Hetero-
`cyclic Derivatives of Asymmetric Diarylborinic Acids," Wuhan
`Daxue Xuebo-Wuhan University Journal, vol. 3; pp. 67-71, (1990),
`(English Abstract).
`"Structure-Activity Studies led to the Discovery of AN2898 in
`Development for Topical Treatment of Psoriasis and Atopic Der-
`matitis", Scientific Presentation at the American Academy of Der-
`matology Annual Meeting, San Francisco, CA Mar. 6-10, 2009.
`"AN2898 Inhibits Crokines Relevant to Topical Treatment of
`Psoriasis and Atopic Dennatitis", Scientific Presentation at the
`American Academy of Dermatology Annual Meeting, San Fran-
`cisco, CA Mar. 6-10. 2009.
`"AN27 18 has Broad Spectrum Antifungal Activity Necessary for
`the Topical Treatment of Skin and Nail Fungal Infections", Scien-
`tific Presentation at the American Academy of Dermatology Annual
`Meeting, San Francisco, CA Mar. 6-10, 2009.
`"AN2718 Demonstrates Significant Efficacy in Three Phase lb
`Psoriasis Microplaque Trials" Scientific Presentation at the Ameri-
`can Academy of Dermatology Annual Meeting, San Francisco, CA
`Mar. 6-10, 2009.
`"AN2728 Demonstrates Significant Safety and Efficacy in Phase Ha
`Double Blind Trial in Plaque Type Psoriasis", Scientific Presenta-
`tion at the American Academy of Dermatology Annual Meeting,
`San Francisco, CA Mar. 6-10, 2009.
`
`

`

`Case 1:18-cv-00202-IMK Document 1-1 Filed 10/30/18 Page 6 of 240 PageID #: 21
`
`US 9,549,938 B2
`Page 5
`
`(56) (cid:9)
`
`References Cited
`
`OTHER PUBLICATIONS
`
`"AN2728 Preclinical Studies Demonstrate an Acceptable Safety
`Profile for the Topical Treatment of Psoriasis and Atopic Dermati-
`tis", Scientific Presentation at the American Academy of Derma-
`tology Annual Meeting, San Francisco, CA May 6-10, 2009.
`"A New Class of Benzoxaborole-based Potent Antitrypanosomal
`Agents: Probing Effect of Different Linkage Groups in
`Trypanosoma brucei Growth Inhibition", Scientific Presentation at
`the American Society of Tropical Medicine and Hygiene Confer-
`ence, New Orleans, LA Dec. 7-11, 2008.
`"AN2920, a Novel Oxaborole, Shows In Vitro and In Vivo Activity
`Against Trypanosomal brucei", Scientific Presentation at the Ameri-
`can Society of Tropical Medicine and Hygiene Conference, New
`Orleans, LA Dec. 7-11, 2008.
`"A Novel Oxaborole, AN3520. Show Efficacy against Human
`African Trypanosomiasis In Vitro and In Vivo, Including Promise in
`a Murine CNS Model of T. brucei Infection", Scientific Presentation
`at the American Society of Tropical Medicine and Hygiene Con-
`ference, New Orleans, LA Dec. 7-11, 2008.
`"Antifungal Activity and Mechanism of Action of a Benzoxaborole,
`AN2718, which is in Development for the Treatment of Tines
`Pedis", Scientific Presentation at the 48th Interscience Conference
`on Antimicrobial Agents and Chemotherapy, Washington, D.C. Oct.
`25-28, 2008.
`"AN2728 Ointment, a Novel Oxaborole with Anti-Inflammatory
`Activity, Demonstrates Safety and Significant Efficacy in a Phase lb
`Psoriasis Plaque Test", Scientific Presentation at Montagna Sym-
`posium on Biology of Skin, Gleneden Beach, OR, Oct. 2-6, 2008.
`"Preclinical Toxicology of AN2728, a Novel Oxaborole in Devel-
`opment for the Topical Treatment of Psoriasis", Scientific Presen-
`tation at the International Investigative Dermatology Conference,
`Kyoto, Japan, May 14-18, 2008.
`"AN2898, a Novel Oxaborole Compound with Anti-Inflammatory
`Activity: Mechanism of Action and in vitro Cytokine
`Scientific Presentation at the International Investigative Dermatol-
`ogy Conference, Kyoto, Japan, May 14-18, 2008.
`"Structure-Activity Studies of AN2728 and AN2898, Novel
`Oxaborole Compounds with Anti-Inflammatory Activity", Scien-
`tific Presentation at the International Investigative Dermatology
`Conference, Kyoto, Japan, May 14-18, 2008.
`"In Vitro Activity and Mechanism of Action of AN2728, a Novel
`Oxaborole in Development for Treatment of Psoriasis", Scientific
`Presentation at the International Investigative Dermatology Confer-
`ence, Kyoto, Japan, May 14-18, 2008.
`"AN2898, a Novel Oxaborole Compound with Anti-Inflammatory
`Activity: Results of In Vivo Efficacy and Preclinical Safety Stud-
`ies", Scientific Presentation at the International Investigative Der-
`matology Conference, Kyoto, Japan, May 14-18, 2008.
`"AN2728, a Novel Oxaborole in Development for Treatment of
`Psoriasis, Demonstrates Significant Activity in a Micro Plaque
`Study", Scientific Presentation at the International Investigative
`Dermatology Conference, Kyoto, Japan, May 14-18, 2008.
`"Preclinical Toxicology of AN2728, a Novel Bonnie Acid Ester
`with Anti-Inflammatory Activity", American Academy of Derma-
`tology, 65th Annual Meeting, Washington, DC, Feb. 2-6, 2007.
`"AN2728, a Novel Oxaborole with Broad-Spectrum In Vitro Anti-
`Inflammatory Activity", American Academy of Dermatology, 65th
`Annual Meeting, Washington, DC, Feb. 2-6, 2007.
`"In Vitro Nail Penetration of AN2690, Effect of Vehicle and
`Co-Efficient of Efficacy", American Academy of Dermatology, 65th
`Annual Meeting, Washington, DC, Feb. 2-6, 2007.
`"Interim Results of a Multi-Center Study to Evaluate the Safety and
`Efficacy of Topically Applied AN2690 5.0% and 7.5% Solutions for
`the Treatment of Onychomycosis of the Great Toenail", American
`Academy of Dermatology, 65th Annual Meeting, Washington, DC,
`Feb. 2-6, 2007.
`"In vivo Nail Residence Time of AN2690, a Novel Broad-Spectrum
`Antifungal Agent in Development for the Topical Treatment of
`Onychomycosis", American Academy of Dermatology, 65th Annual
`Meeting, Washington, DC, Feb. 2-6, 2007.
`
`"An Open-Label, Multi-dose Study of Absorption and Systemic
`Pharmacolcinetics of AN2690 Applied as a 7.5% Solution to All
`Toenails of Adult Patients with Moderate to Severe
`Onychomycosis", American Academy of Dermatology, 65th Annual
`Meeting, Washington, DC, Feb. 2-6, 2007.
`"Medicinal Chemistry Development of AN2728, a Novel
`Oxaborole in Development for the Topical Treatment of Psoriasis",
`American Academy of Dermatology, 65th Annual Meeting, Wash-
`ington, DC, Feb. 2-6, 2007.
`"Skin Penetration and Anti-Inflammatory Activity of AN2728, a
`Novel Oxaborole", American Academy of Dermatology, 65th
`Annual Meeting, Washington, DC, Feb. 2-6, 2007.
`"Nail Penetration and Nail Concentration of AN2690, a Novel
`Broad-Spectrum Antifungal Agent in Development for the Topical
`Treatment of Onychomycosis", Scientific Presentation at the Ameri-
`can Associate of Pharmaceutical Scientist, Annual Meeting, San
`Antonio, TX, Oct. 29-Nov. 2, 2006.
`Aswell et al. CAS: 141: 296025, 2004.
`Nalunov, et al. "Polyfunctionalized Aryllead Triacetates in a Cas-
`cade Synthesis of Tetracyclic Isochromanocoumarin-Type Com-
`pounds", Synthesis 2005, pp. 1178-1182.
`Mikarni, et al., "Synthesis of Sugar-containing Polymers by Self-
`condensation with Diboronic Acid", J.Chem. Soc., Chem. Com-
`mon., 1995, pp. 153-154.
`Stones, et al. "Modular Solid-Phase Synthetic Approach to Opti-
`mize Structural and Electronic Properties of Oligoboronic Acid
`Receptors and Sensors for the Aqueous Recognition of Oligosac-
`charides", Chem.Eur. J. 2004, 10, pp. 92-100.
`Linnane, et al. "The Synthesis and Properties of a Calixarene-based
`'Sugar Bowl'", J. chem. Soc., Chem. Commun., 1995, pp. 1997-
`1998.
`Coalition for Affordable Drugs X LLC, v. Anacor Pharmaceuticals,
`Inc., Case No. Unassigned, U.S. Pat. No. 7,582,621, Petition for
`Inter Partes Review of U.S. Pat. No. 7,582,621, 66 pages. [IPR2015-
`01776].
`Coalition for Affordable Drugs X LLC, v. Anacor Pharmaceuticals,
`Inc., Case

This document is available on Docket Alarm but you must sign up to view it.


Or .

Accessing this document will incur an additional charge of $.

After purchase, you can access this document again without charge.

Accept $ Charge
throbber

Still Working On It

This document is taking longer than usual to download. This can happen if we need to contact the court directly to obtain the document and their servers are running slowly.

Give it another minute or two to complete, and then try the refresh button.

throbber

A few More Minutes ... Still Working

It can take up to 5 minutes for us to download a document if the court servers are running slowly.

Thank you for your continued patience.

This document could not be displayed.

We could not find this document within its docket. Please go back to the docket page and check the link. If that does not work, go back to the docket and refresh it to pull the newest information.

Your account does not support viewing this document.

You need a Paid Account to view this document. Click here to change your account type.

Your account does not support viewing this document.

Set your membership status to view this document.

With a Docket Alarm membership, you'll get a whole lot more, including:

  • Up-to-date information for this case.
  • Email alerts whenever there is an update.
  • Full text search for other cases.
  • Get email alerts whenever a new case matches your search.

Become a Member

One Moment Please

The filing “” is large (MB) and is being downloaded.

Please refresh this page in a few minutes to see if the filing has been downloaded. The filing will also be emailed to you when the download completes.

Your document is on its way!

If you do not receive the document in five minutes, contact support at support@docketalarm.com.

Sealed Document

We are unable to display this document, it may be under a court ordered seal.

If you have proper credentials to access the file, you may proceed directly to the court's system using your government issued username and password.


Access Government Site

We are redirecting you
to a mobile optimized page.





Document Unreadable or Corrupt

Refresh this Document
Go to the Docket

We are unable to display this document.

Refresh this Document
Go to the Docket