throbber
(12) United States Patent
`Wiegand et al.
`
`(10) Patent No.:
`(45) Date of Patent:
`
`US 7,521,049 B2
`Apr. 21, 2009
`
`USOO752.1049B2
`
`(54) USE OF VEGF INHIBITORS FOR
`TREATMENT OF EYE DISORDERS
`(75) Inventors: Stanley J. Wiegand, Croton-on-Hudson,
`NY (US); Nicholas J. Papadopoulos,
`LaGrangeville, NY (US); George D.
`Yancopoulos, Yorktown Heights, NY
`(US); James P. Fandl, LaGrangeville,
`NY (US); Thomas J. Daly, New City,
`NY (US)
`(73) Assignee: Regeneron Pharmaceuticals, Inc.,
`Tarrytown, NY (US)
`Subject to any disclaimer, the term of this
`patent is extended or adjusted under 35
`U.S.C. 154(b) by 0 days.
`(21) Appl. No.: 11/998,709
`
`(*) Notice:
`
`(22) Filed:
`(65)
`
`Nov.30, 2007
`Prior Publication Data
`US 2008/022OOO4A1
`Sep. 11, 2008
`O
`O
`Related U.S. Application Data
`(60) Division of application No. 1 1/218.234, filed on Sep.
`1, 2005, now Pat. No. 7,303,747, which is a continua-
`tion-in-part of application No. 11/089,803, filed on
`Mar. 25, 2005, now Pat. No. 7,306,799, which is a
`continuation-in-part of application No. 10/988,243,
`
`(52) U.S. Cl. ..................... 424/134.1; 424/192.1; 514/2:
`514/12:530/350,536/23.4
`(58) Field of Classification Search ............... ... ... None
`See application file for complete search history.
`References Cited
`
`(56)
`
`U.S. PATENT DOCUMENTS
`6,100,071 A
`8/2000 Davis-Smyth et al.
`6,897.294 B2
`5/2005 Davis-Smyth et al.
`2005/0281831 A1 12/2005 Davis-Smyth et al.
`
`WO
`WO
`WO
`
`FOREIGN PATENT DOCUMENTS
`WO97/.44453
`11, 1997
`WO98, 13071
`4f1998
`WO99/03996
`1, 1999
`
`OTHER PUBLICATIONS
`
`Terman, B.I., et al., (1991) Oncogene 6: 1677-1683.
`Terman, B.I., et al., (1992) Biochem. Biophys. Res. Comm.
`187(3): 1579-1586.
`Davis-Smyth, T., et al., (1996) The EMBO Journal 15(18):4919
`4927.
`Holash, J., et al. (2002) PNAS 99(17); 11393-11398.
`Heidaran, M.A., et al., (1990).J. Bio, Chem. 265(31): 18741-18744.
`Cunningham, S.A., et al., (1997) Biochem. Biophys. Res. Comm.
`E.
`(1998) J. Bio. Chem. 273(18): 11 197-11204
`un, J., et al.,
`SO C.
`:
`
`ENE'S Winancischisis.
`Barleon, B., et al., (1997) J. Bio. Chem. 272(16):10382-10388.
`852. filed as application No PCT/US00/442 on Ma s
`s
`pp
`"'Y
`Davis-Smyth, T., et al., (1998) J. Bio. Chem. 273(6):3216-3222.
`23, 2000, now Pat. No. 7,070,959, said application No.
`1 1/218.234 is a continuation-in-part of application No.
`Primary Examiner Christine J. Saoud
`10/880,021, filed on Jun. 29, 2004, now Pat. No. 7,279,
`Assistant Examiner—Jon M Lockard
`159, which is a continuation-in-part of application No.
`(74) Attorney, Agent, or Firm Valeta Gregg, Esq.
`10/609,775, filed on Jun. 30, 2003, now Pat. No. 7,087,
`411.
`(60) Provisional application No. 60/138,133, filed on Jun.
`8, 1999.
`s
`(51) Int. Cl.
`A6 IK 38/18
`C07K I4/7
`CI2N 5/62
`
`(57)
`
`ABSTRACT
`-
`Modified chimeric polypeptides with improved pharmacoki
`netics and improved tissue penetration are disclosed useful
`for treating eye disorders, including age-related macular
`degeneration and diabetic retinopathy.
`
`15 Claims, 11 Drawing Sheets
`
`(2006.01)
`(2006.01)
`(2006.01)
`
`Regeneron Exhibit 2035
`Page 01 of 33
`
`

`

`U.S. Patent
`
`Apr. 21, 2009
`
`Sheet 1 of 11
`
`US 7,521,049 B2
`
`
`
`
`
`| 3. n61–
`
`
`
`
`
`(e) IOWOH -ZHI HHOAA/HORA(e) LOWOH’OECTXII,IZGII JIH/HORA(Wu) 99 I HORA?
`
`
`
`
`
`
`
`Regeneron Exhibit 2035
`Page 02 of 33
`
`

`

`U.S. Patent
`
`Apr. 21, 2009
`
`Sheet 2 of 11
`
`US 7,521,049 B2
`
`
`
`Z ?un61–
`
`00 ||
`
`| || '0
`
`u/6r JOdeoe - pelypOW
`
`Regeneron Exhibit 2035
`Page 03 of 33
`
`

`

`U.S. Patent
`
`Apr. 21, 2009
`
`Sheet 3 of 11
`
`US 7,521,049 B2
`
`
`
`
`
`£ ?un61–
`
`OZG |0!
`
`00 ||
`
`0 ||
`
`| 070
`
`u/6r Odeoell-pepOW
`
`Regeneron Exhibit 2035
`Page 04 of 33
`
`

`

`U.S. Patent
`
`Apr. 21, 2009
`
`Sheet 4 of 11
`
`US 7,521,049 B2
`
`wo
`
`
`
`f
`reas
`C
`
`O.
`
`s
`9
`O
`O
`L
`
`o
`
`O
`O
`
`O
`s
`O)
`8
`N
`s
`(D
`D
`
`s
`
`
`
`C.
`c
`
`{
`
`N
`
`t
`
`O
`
`O
`w
`
`C
`y
`
`r
`
`e
`
`uO90s/eonu (eleulopue euph9.ield
`
`Regeneron Exhibit 2035
`Page 05 of 33
`
`

`

`U.S. Patent
`
`Apr. 21, 2009
`
`Sheet 5 of 11
`
`US 7,521,049 B2
`
`
`
`
`
`K
`
`(r.
`
`c
`parison
`
`33.IVANO
`
`Regeneron Exhibit 2035
`Page 06 of 33
`
`

`

`U.S. Patent
`
`Apr. 21, 2009
`
`Sheet 6 of 11
`
`US 7,521,049 B2
`
`
`
`as
`
`s
`\C
`
`g
`f
`
`C
`r
`
`t
`er
`
`D
`(N
`
`C
`user
`
`O
`
`(0x.uu) ANJo ea-Ive)0L
`
`Regeneron Exhibit 2035
`Page 07 of 33
`
`

`

`Apr. 21, 2009
`
`Sheet 7 of 11
`
`US 7,521,049 B2
`
`oF
`
`U.S. Patent
`
`7oinbi-
`
`S6S0000=d
`
`[61S700=d
`
`dIVULADAA
`
`(OZ=N)
`
`(QZ=u)
`
`
`
`Yd 11y
`
`
`
`dVUL-ADAA
`
`(g[=0)
`
`ays
`
`(gT=u)
`
`pp
`
`2am fo ew
`ao ooo oe
`
`eve
`oOo oO
`
`YY
`
`Regeneron Exhibit 2035
`Page 08 of 33
`
`Regeneron Exhibit 2035
`Page 08 of 33
`
`
`
`

`

`U.S. Patent
`
`Apr. 21, 2009
`
`Sheet 8 of 11
`
`US 7,521,049 B2
`
`
`
`8 ?un61–
`
`| 0:0 > d |
`
`OOZ
`00£
`00 I
`(un) SSeu)01u
`
`Regeneron Exhibit 2035
`Page 09 of 33
`
`

`

`U.S. Patent
`
`Apr. 21, 2009
`
`Sheet 9 of 11
`
`US 7,521,049 B2
`
`
`
`g
`s
`E ins
`2
`
`se
`
`o
`9.
`
`sei
`is 3. s
`
`e
`
`S
`
`O
`
`N
`
`e
`
`S.
`
`S es
`9.
`s
`
`O)
`9)
`O)
`L
`
`8 o
`
`o e
`s
`Y.
`
`N
`
`ves
`
`Suose y epelus) 9,
`
`Regeneron Exhibit 2035
`Page 10 of 33
`
`

`

`U.S. Patent
`
`Apr. 21, 2009
`
`Sheet 10 of 11
`
`US 7,521,049 B2
`
`
`
`
`
`se
`
`S
`
`co
`vas
`
`CN
`var
`
`o
`O
`
`rt
`O
`
`d
`O
`
`UU Ogiy O SCW
`
`Regeneron Exhibit 2035
`Page 11 of 33
`
`

`

`U.S. Patent
`
`Apr.21, 2009
`
`Sheet 11 of 11
`
`US 7,521,049 B2
`
`anti-VEGFAb
`LogMTrapor
`
`Figure11
`
`Regeneron Exhibit 2035
`Page 12 of 33
`
`Regeneron Exhibit 2035
`Page 12 of 33
`
`

`

`1.
`USE OF VEGF INHIBITORS FOR
`TREATMENT OF EYE DISORDERS
`
`CROSS-REFERENCE TO RELATED
`APPLICATIONS
`
`This application is a divisional of U.S. patent application
`Ser. No. 1 1/218,234 filed 1 Sep. 2005, now U.S. Pat. No.
`7.303,747, which is a continuation-in-part of application Ser.
`No. 11/089,803 filed 25 Mar. 2005, now U.S. Pat. No. 7,306,
`799, which is a continuation-in-part of application Ser. No.
`10/988,243 filed 12 Nov. 2004, now U.S. Pat. No. 7,303,746,
`which is a continuation-in-part of application Ser. No.
`10/009,852 filed 6 Dec. 2001, now U.S. Pat. No. 7,070,959,
`which is the National Stage of International Application No.
`PCT/US00/14142 filed 23 May 2000, which claims the ben
`efit under 35 USC S 119(e) of U.S. Provisional 60/138,133
`filed 8 Jun. 1999, and U.S. patent application Ser. No. 1 1/218,
`234 filed 1 Sep. 2005, now U.S. Pat. No. 7,303,747 is a
`continuation-in-part of application Ser. No. 10/880,021 filed
`29 Jun. 2004, now U.S. Pat. No. 7,279,159, which is a con
`tinuation-in-part of application Ser. No. 10/609.775 filed 30
`Jun. 2003, now U.S. Pat. No. 7,087,411, which applications
`are herein specifically incorporated by reference in their
`entireties.
`
`10
`
`15
`
`25
`
`BACKGROUND
`
`Statement Regarding Related Art
`
`30
`
`35
`
`A class of cell-derived dimeric mitogens with selectivity
`for vascular endothelial cells has been identified and desig
`nated vascular endothelial cell growth factor (VEGF). VEGF
`is a dimer with an apparent molecular mass of about 46 kDa
`with each subunit having an apparent molecular mass of
`about 23 kDa. The membrane-bound tyrosine kinase recep
`tor, known as Flt (also known as VEGFR2), was shown to be
`a VEGF receptor (DeVries et al. (1992) Science 255:989
`991). Anotherform of the VEGF receptor, designated KDR or
`Flk-1 (also known as VEGFR3), is also known to bind VEGF
`40
`and induce mitogenesis (Terman et al. (1991) Oncogene
`6:1677-1683; Terman et al. (1992) Biochem. Biophys. Res.
`Comm. 187: 1579-1586).
`U.S. Pat. No. 6,011,003 describes an altered, soluble form
`of Flt polypeptide capable of binding to VEGF comprising
`45
`five or fewer complete immunoglobulin domains. WO
`97/.44453 describes chimeric VEGF receptor proteins com
`prising amino acid sequences derived from VEGF receptors
`Flt1 and KDR.
`
`BRIEF SUMMARY OF THE INVENTION
`
`50
`
`55
`
`The invention features a therapeutic method for treating or
`ameliorating an eye disorder, comprising administering a vas
`cular endothelial growth factor (VEGF) inhibitor to a patient
`in need thereof. In one embodiment, the eye disorder treated
`is age related macular degeneration. In another embodiment,
`the eye disorder treated is diabetic retinopathy.
`Preferably, the VEGF inhibitor used in the method of the
`invention comprises an immunoglobulin-like (Ig) domain 2
`60
`of a first VEGF receptor and Ig domain 3 of a second VEGF
`receptor, and a multimerizing component, wherein the first
`VEGF receptor is Flt1, the second VEGF receptor is Flk1 or
`Flt4, and the multimerizing component is selected from the
`group consisting of (i) an amino acid sequence between 1 to
`about 200 amino acids in length having at least one cysteine
`residue, and (ii) an immunoglobulin domain, or fragment of
`
`65
`
`US 7,521,049 B2
`
`2
`an immunoglobulin domain. In specific embodiments, the
`VEGF inhibitor is a fusion polypeptide “VEGF trap' selected
`from the group consisting of SEQ ID NO:2
`(Flt1D2. Flk1D3FcAC1(a)),
`SEQ
`ID
`NO:4
`(Flt1D2.VEGFR3D3.FcAC1(a)),
`SEQ
`ID
`NO:6
`(VEGFR1R2 FcAC1(a)), and SEQ ID NO:23. In another
`embodiment, the VEGF inhibitor is a fusion polypeptide
`encoded by a nucleotide sequence selected from the group
`consisting of SEQ ID NO:1, 3, 5, 22, and a nucleotide
`sequence which, as a result of the degeneracy of the genetic
`code, differs from the nucleotide sequence of SEQID NO:1,
`3, 5, and 22.
`In a second aspect, the invention features a method for the
`treatment of a human Subject diagnosed with an eye disorder,
`comprising administering an effective amount of a vascular
`endothelial growth factor (VEGF) inhibitor to the human
`Subject, the method comprising administering to the Subject
`an initial dose of at least approximately 25-4000 ug VEGF
`inhibitor protein to an affected eye, and administering to the
`subject a plurality of subsequent doses of the VEGF inhibitor
`protein in an amount that is approximately the same or less
`than the initial dose, wherein the Subsequent doses are sepa
`rated in time from each other by at least two weeks. The eye
`disorder is one of age-related macular degeneration or dia
`betic retinopathy. In various embodiments, the initial dose is
`at least approximately 25 to 4000 ug of VEGF inhibitor pro
`tein. In various embodiments, the Subsequent doses are sepa
`rated in time from each other by at least two weeks to 12
`months; more preferably, the Subsequent doses are separated
`in time from each other by at least 3-6 months. The VEGF
`inhibitor protein is administered directly to the affected eye,
`including by use of eye drops or intravitreal injection. Pref
`erably, the VEGF inhibitor is a dimer having two fusion
`polypeptides consisting essentially of an immunoglobulin
`like (Ig) domain 2 of Flt1 and Ig domain 3 of Flk1 or Flt4, and
`a multimerizing component. In specific embodiments, the
`VEGF inhibitor is a dimer comprising the fusion polypeptide
`of SEQID NO:2, 4, 6, or 23.
`Other objects and advantages will become apparent from a
`review of the ensuing detailed description.
`
`BRIEF DESCRIPTION OF THE FIGURES
`
`FIG.1. Biacore analysis of binding stoichiometry. Binding
`Stoichiometry was calculated as a molar ratio of bound
`VEGF165 to the immobilized Flt1D2Flk1D3.FcAC1(a) or
`VEGFR1R2-FcAC1(a), using the conversion factor of 1000
`RU equivalent to 1 ng/ml.
`FIG. 2. Pharmacokinetics of Flt1(1-3)-Fc (A40),
`Flt1D2. Flk1D3.FcAC1(a) and VEGFR1R2-FcAC1(a).
`FIG. 3. Pharmacokinetics of Flt1(1-3)-Fc (A40),
`Flt1D2. Flk1D3.FcAC1(a) and Flt1D2.VEGFR3D3.FcAC1
`(a).
`FIG. 4. VEGFR1R2-FcAC1(a) prevents neovasculariza
`tion induced by retinal ischemia. Serial 10um cross sections
`were collected and stained with hematoxylin and eosin. For
`each animal, nuclei in preretinal neoVessels were counted in a
`series often sections within 300 microns of the optic nerve
`head and averaged. Counts were obtained in three indepen
`dent experiments, n24 for each treatment group in each
`study.
`FIG. 5. Effect of subcutaneous VEGFR1R2-FcAC1(a)
`injections on choroidal neovascularization area. The size of
`CNV lesions was measured in choroidal flat mounts. The
`images were digitized using an Axioskop microscope
`equipped with a video camera, and the total area of choroidal
`
`Regeneron Exhibit 2035
`Page 13 of 33
`
`

`

`US 7,521,049 B2
`
`3
`neovascularization associated with each laser burn was mea
`Sured using Image-Pro Plus Software.
`FIG. 6. VEGFR1R2-FcAC1(a) inhibits subretinal neovas
`cularization in Rho/VEGF transgenic mice.
`FIGS. 7A-B. VEGF-Induced breakdown of the blood reti
`nal barrier. A. Following intravitreal injections of VEGF,
`adult mice (C57BL/6) treated withinjections of VEGFR1R2
`FcAC1(a) had a significantly smaller retina to lung leakage
`ratio than mice treated with Fc fragment, indicating less
`breakdown of BRB. B. Double transgenic mice treated with
`injections of VEGFR1R2-FcAC1(a) had a significant reduc
`tion in the retina to lung leakage ratio compared to mice
`treated with Fc fragment.
`FIG.8. Effect of VEGFR1R2-FcAC1(a) administration on
`corneal thickness in Suture and alkaliburn models of corneal
`trauma. Corneas were injured by Suture placement or appli
`cation of NaOH as described, and a single dose of
`VEGFR1R2-FcAC1(a) (25 mg/kg, ip) or saline (n=5 per
`group) was administered immediately following injury. The
`contralateral cornea served as normal, undamaged controls.
`Corneas were collected 7 days later and cross-sections were
`cut and stained with hematoxylin and eosin. Corneal thick
`ness was measured as an index of corneal edema.
`FIG. 9. System or intravitreal VEGF trap protein adminis
`tration prevents laser-induced choroidal neovascularization
`(CNV) and reverses vascular leak in established lesions.
`FIG. 10. Dose response curve of Baf/Flt cells grown in
`VEGF.
`FIG. 11. Inhibition of VEGF growth response by VEGF
`trap VEGFR1R2-FcAC1(a) or anti-VEGF antibody.
`
`10
`
`15
`
`25
`
`30
`
`4
`Nucleic Acid Constructs and Encoded Fusion Polypeptides
`The present invention provides for the construction of
`nucleic acid molecules encoding chimeric polypeptide mol
`ecules that are inserted into a vector that is able to express the
`chimeric polypeptide molecules when introduced into an
`appropriate host cell. Appropriate host cells include, but are
`not limited to, bacterial cells, yeast cells, insect cells, and
`mammaliancells. Any of the methods known to one skilled in
`the art for the insertion of DNA fragments into a vector may
`be used to construct expression vectors encoding the chimeric
`polypeptide molecules under control of transcriptional/trans
`lational control signals. These methods may include in vitro
`recombinant DNA and synthetic techniques and in vivo
`recombinations (See Sambrook, et al., Molecular Cloning. A
`Laboratory Manual, Cold Spring Harbor Laboratory; Current
`Protocols in Molecular Biology, Eds. Ausubel, et al., Greene
`Publ. Assoc., Wiley-Interscience, N.Y.).
`Expression of nucleic acid molecules encoding the chi
`meric polypeptide molecules may be regulated by a second
`nucleic acid sequence so that the chimeric polypeptide mol
`ecule is expressed in a host transformed with the recombinant
`DNA molecule. For example, expression of the chimeric
`polypeptide molecules described herein may be controlled by
`any promoter/enhancer element known in the art.
`Thus, according to the invention, expression vectors
`capable of being replicated in a bacterial or eukaryotic host
`comprising chimeric polypeptide molecule-encoding nucleic
`acids as described herein, are used to transfect the host and
`thereby direct expression of such nucleic acids to produce the
`chimeric polypeptide molecules, which may then be recov
`ered in a biologically active form. As used herein, a biologi
`cally active form includes aform capable of binding to VEGF.
`Expression vectors containing the chimeric nucleic acid mol
`ecules described herein can be identified by three general
`approaches: (a) DNA-DNA hybridization, (b) presence or
`absence of “marker gene functions, and (c) expression of
`inserted sequences. In the first approach, the presence of a
`foreign gene inserted in an expression vector can be detected
`by DNA-DNA hybridization using probes comprising
`sequences that are homologous to the inserted chimeric
`polypeptide molecule sequences. In the second approach, the
`recombinant vector/host system can be identified and
`selected based upon the presence or absence of certain
`“marker gene functions (e.g., thymidine kinase activity,
`resistance to antibiotics, transformation phenotype, occlu
`sion body formation in baculovirus, etc.) caused by the inser
`tion of foreign genes in the vector. For example, if the chi
`meric polypeptide molecule DNA sequence is inserted within
`the marker gene sequence of the vector, recombinants con
`taining the insert can be identified by the absence of the
`marker gene function. In the third approach, recombinant
`expression vectors can be identified by assaying the foreign
`gene product expressed by the recombinant. Such assays can
`be based, for example, on the physical or functional proper
`ties of the chimeric polypeptide molecules.
`Cells of the present invention may transiently or, prefer
`ably, constitutively and permanently express the chimeric
`polypeptide molecules.
`The chimeric polypeptide molecules may be purified by
`any technique which allows for the Subsequent formation of a
`stable, biologically active chimeric polypeptide molecule.
`For example, and not by way of limitation, the factors may be
`recovered from cells either as soluble proteins or as inclusion
`bodies, from which they may be extracted quantitatively by
`8M guanidinium hydrochloride and dialysis (see, for
`example, U.S. Pat. No. 5,663,304). In order to further purify
`the factors, conventional ion exchange chromatography,
`
`DETAILED DESCRIPTION OF THE INVENTION
`
`35
`
`45
`
`It has been a longstanding problem in the art to produce a
`receptor-based VEGFantagonist that has a pharmacokinetic
`profile that is appropriate for consideration of the antagonist
`as a therapeutic candidate. Applicants describe herein, for the
`first time, a chimeric polypeptide molecule, capable of
`antagonizing VEGF activity, that exhibits improved pharma
`40
`cokinetic properties as compared to other known receptor
`based VEGF antagonists. The chimeric polypeptide mol
`ecules described herein thus provide appropriate molecules
`for use in therapies in which antagonism of VEGF is a desired
`result.
`The extracellular ligand binding domain is defined as the
`portion of a receptor that, in its native conformation in the cell
`membrane, is oriented extracellularly where it can contact
`with its cognate ligand. The extracellular ligand binding
`domain does not include the hydrophobic amino acids asso
`ciated with the receptor's transmembrane domain or any
`amino acids associated with the receptors intracellular
`domain. Generally, the intracellular or cytoplasmic domain of
`a receptor is usually composed of positively charged or polar
`amino acids (i.e. lysine, arginine, histidine, glutamic acid,
`aspartic acid). The preceding 15-30, predominantly hydro
`phobic or apolar amino acids (i.e. leucine, Valine, isoleucine,
`and phenylalanine) comprise the transmembrane domain.
`The extracellular domain comprises the amino acids that
`precede the hydrophobic transmembrane stretch of amino
`acids. Usually the transmembrane domain is flanked by posi
`tively charged or polar amino acids such as lysine or arginine.
`von Heijne has published detailed rules that are commonly
`referred to by skilled artisans when determining which amino
`acids of a given receptor belong to the extracellular, trans
`membrane, or intracellular domains (See, von Heijne (1995)
`BioEssays 17:25.
`
`50
`
`55
`
`60
`
`65
`
`Regeneron Exhibit 2035
`Page 14 of 33
`
`

`

`5
`hydrophobic interaction chromatography, reverse phase
`chromatography or gel filtration may be used.
`The method of the invention encompasses the use of a
`fusion protein consisting essentially of first and second vas
`cular endothelial growth factor (VEGF) receptor components
`and a multimerizing component, wherein the first VEGF
`receptor component is an immunoglobulin-like (Ig) domain 2
`of Flt1, the second VEGF receptor component is an Ig domain
`3 of a Flk1 or Flt4, and the multimerizing component is
`selected from the group consisting of (i) a multimerizing
`component comprising a cleavable region (C-region), (ii) a
`truncated multimerizing component, (iii) an amino acid
`sequence between 1 to about 200 amino acids in length hav
`ing at least one cysteine residue, (iv) a leucine Zipper, (v) a
`helix loop motif (vi) a coil-coil motif, and (vii) an immuno
`globulin domain. Examples of the VEGF inhibitors useful in
`the method of the invention include fusion proteins encoded
`by a nucleotide sequence selected from the group consisting
`of the nucleotide sequence of SEQID NO:1, 3, 5, 22, and a
`nucleotide sequence which, as a result of the degeneracy of
`the genetic code, differs from the nucleotide sequence of SEQ
`ID NO:1, 3, 5, or 22, and fusion protein selected from the
`group consisting of SEQ ID NO:2 (Flt1D2. Flk1D3FcAC1
`(a)), SEQID NO:4 (Flt1D2.VEGFR3D3.FcAC1(a)), SEQID
`NO:6 (VEGFR1R2 FcAC1(a)) and (SEQID NO:23).
`25
`Therapeutic Methods
`The present invention also has diagnostic and therapeutic
`utilities. In particular embodiments of the invention, methods
`of detecting aberrancies in the function or expression of the
`chimeric polypeptide molecules described herein may be
`used in the diagnosis of disorders. In other embodiments,
`manipulation of the chimeric polypeptide molecules or ago
`nists orantagonists which bind the chimeric polypeptide mol
`ecules may be used in the treatment of diseases. In further
`embodiments, the chimeric polypeptide molecule is utilized
`as an agent to block the binding of a binding agent to its target.
`By way of example, but not limitation, the method of the
`invention may be useful in treating clinical conditions that are
`characterized by vascular permeability, edema or inflamma
`tion Such as brain edema associated with injury, stroke or
`tumor, edema associated with inflammatory disorders such as
`psoriasis or arthritis, including rheumatoid arthritis; asthma,
`generalized edema associated with burns; ascites and pleural
`effusion associated with tumors, inflammation or trauma;
`chronic airway inflammation; capillary leak syndrome; sep
`sis; kidney disease associated with increased leakage of pro
`tein; and eye disorders such as age related macular degenera
`tion and diabetic retinopathy.
`Combination Therapies
`In numerous embodiments, a VEGF inhibitor may be
`administered in combination with one or more additional
`compounds or therapies, including a second VEGF inhibitor.
`Combination therapy includes administration of a single
`pharmaceutical dosage formulation which contains a VEGF
`55
`inhibitor molecule and one or more additional agents; as well
`as administration of a VEGF inhibitor and one or more addi
`tional agent(s) in its own separate pharmaceutical dosage
`formulation. For example, a VEGF inhibitor and a cytotoxic
`agent, a chemotherapeutic agent or a growth inhibitory agent
`can be administered to the patient together in a single dosage
`composition Such as a combined formulation, or each agent
`can be administered in a separate dosage formulation. Where
`separate dosage formulations are used, the VEGF-specific
`fusion protein of the invention and one or more additional
`agents can be administered concurrently, or at separately
`staggered times, i.e., sequentially. The therapeutic methods of
`
`65
`
`45
`
`50
`
`60
`
`US 7,521,049 B2
`
`5
`
`10
`
`15
`
`6
`the invention may also be combined with other agents or
`medical procedures used for treatment of eye disorders.
`Treatment Population
`The eye comprises several structurally and functionally
`distinct vascular beds, which Supply ocular components criti
`cal to the maintenance of vision. These include the retinal and
`choroidal vasculatures, which Supply the inner and outer por
`tions of the retina, respectively, and the limbal vasculature
`located at the periphery of the cornea. Injuries and diseases
`that impair the normal structure or function of these vascular
`beds are among the leading causes of visual impairment and
`blindness. For example, diabetic retinopathy is the most com
`mon disease affecting the retinal vasculature, and is the lead
`ing cause of vision loss among the working age population in
`the United States. Vascularization of the cornea secondary to
`injury or disease is yet another category of ocular vascular
`disease that can lead to severe impairment of vision.
`"Macular degeneration is a medical term that applies to
`any of several disease syndromes which involve a gradual loss
`or impairment of eyesight due to cell and tissue degeneration
`of the yellow macular region in the center of the retina.
`Macular degeneration is often characterized as one of two
`types, non-exudative (dry form) or exudative (wet form).
`Although both types are bilateral and progressive, each type
`may reflect different pathological processes. The wet form of
`age-related macular degeneration (AMD) is the most com
`mon form of choroidal neovascularization and a leading
`cause of blindness in the elderly. AMD affects millions of
`Americans over the age of 60, and is the leading cause of new
`blindness among the elderly. It is characterized and usually
`diagnosed by the presence of elevated levels of two types of
`cellular debris within the retina, called drusen and lipofuscin.
`There are several types of symptomatic treatment, how
`ever, that have been used with limited and isolated success,
`depending on the particular condition of the patient, to treat
`exudative (wet form) macular degeneration. Laser photoco
`agulation therapy may benefit certain patients with macular
`degeneration. However, there are high recurrence rates for
`selected choroidal neovascular membranes which may ini
`tially respond to laser therapy. Vision loss may also result
`from the laser therapy. Low dose radiation (teletherapy) has
`also been hypothesized as a possible treatment to induce
`regression of choroidal neovascularization. Surgical removal
`of neovascular membranes is another possible treatment, but
`it is a highly specialized procedure and reportedly has not had
`promising results to date. There is presently no effective
`treatment for non-exudative (dry form) macular degenera
`tion. Management of non-exudative macular degeneration is
`limited to early diagnosis and careful follow-up to determine
`if the patient develops choroidal neovascularization. Protec
`tion against exposure to ultraviolet light and prescribed dos
`ages of anti-oxidant vitamins (e.g., vitamin A, 3-carotene,
`lutein, Zeaxanthin, vitamin C and vitamin E) and Zinc may
`also be of some benefit, but as yet these treatments remain
`unproven.
`Accordingly, the population to be treated by the method of
`the invention is preferably one of (i) a human Subject diag
`nosed as Suffering from macular degeneration, (ii) a human
`Subject diagnosed as Suffering from diabetes-related retin
`opathy, and (iii) a human Subject Suffering from pathological
`vascularization of the cornea secondary to injury or disease.
`Methods of Administration and Compositions
`Preferably, administration of the VEGF inhibitor will be
`directly to the eye, e.g., topical. Topical methods of adminis
`tration include, for example, by eye drops, Subconjunctival
`
`Regeneron Exhibit 2035
`Page 15 of 33
`
`

`

`US 7,521,049 B2
`
`5
`
`15
`
`25
`
`30
`
`35
`
`40
`
`7
`injections or implants, intravitreal injections or implants, Sub
`Tenon's injections or implants, incorporation in Surgical irri
`gating Solutions, etc.
`Compositions suitable for topical administration are
`known to the art (see, for example, US Patent Application
`2005/0059639). In various embodiments, compositions of
`the invention can comprise a liquid comprising an active
`agent in Solution, in Suspension, or both. As used herein,
`liquid compositions include gels. Preferably the liquid com
`position is aqueous. Alternatively, the composition can take
`10
`form of an ointment. In a preferred embodiment, the compo
`sition is an in situ gellable aqueous composition, more pref
`erably an in situ gellable aqueous solution. Such a composi
`tion can comprise agelling agent in a concentration effective
`to promote gelling upon contact with the eye or lacrimal fluid
`in the exterior of the eye. Aqueous compositions of the inven
`tion have ophthalmically compatible pH and osmolality. The
`composition can comprise an ophthalmic depot formulation
`comprising an active agent for Subconjunctival administra
`tion. The microparticles comprising active agent can be
`embedded in a biocompatible pharmaceutically acceptable
`polymer or a lipid encapsulating agent. The depot formula
`tions may be adapted to release all or substantially all the
`active material over an extended period of time. The polymer
`or lipid matrix, if present, may be adapted to degrade Suffi
`ciently to be transported from the site of administration after
`release of all or substantially all the active agent. The depot
`formulation can be a liquid formulation, comprising a phar
`maceutical acceptable polymer and a dissolved or dispersed
`active agent. Upon injection, the polymer forms a depot at the
`injections site, e.g. by gelifying or precipitating. The compo
`sition can comprise a solid article that can be inserted in a
`Suitable location in the eye, Such as between the eye and
`eyelid or in the conjuctival sac, where the article releases the
`active agent. Solid articles suitable for implantation in the eye
`in Such fashion generally comprise polymers and can be
`bioerodible or non-bioerodible.
`In one embodiment of the method of the invention, a
`human Subject with at least one visually impaired eye is
`treated with 25-4000 ug of a VEGF inhibitor protein via
`intravitreal injection. Improvement of clinical symptoms are
`monitored by one or more methods known to the art, for
`example, indirect ophthalmoscopy, fundus photography,
`fluorescein angiopathy, electroretinography, external eye
`examination, slit lamp biomicroscopy, applanation tonom
`45
`etry, pachymetry, and autorefaction. Subsequent doses may
`be administered weekly or monthly, e.g., with a frequency of
`2-8 weeks or 1-12 months apart.
`Other features of the invention will become apparent in the
`course of the following descriptions of exemplary embodi
`ments which are given for illustration of the invention and are
`not intended to be limiting thereof.
`
`50
`
`EXAMPLES
`
`Example 1
`
`55
`
`Modified Flt1 Receptor Vector Construction
`
`Chimeric molecules were constructed, denoted R1R2
`(Flt1...D2. Flk1D3.FcAC1(a) and VEGFR1R2-FcAC1(a) and
`R1R3 (Flt1D2.VEGFR3D3-FcAC1(a) and VEGFR1R3
`FcAC1(a) respectively, wherein R1 and Flt1D2=Ig domain 2
`of Flt1 (VEGFR1); R2 and Flk1D3–Ig domain 3 of Flk1
`(VEGFR2); and R3 and VEGFR3D3–Ig domain 3 of Flt4
`(VEGFR3)) were much less sticky to ECM, as judged by an
`in vitro ECM binding assay and had greatly improved PK as
`
`60
`
`65
`
`8
`described herein. In addition, these molecules were able to
`bind VEGF tightly and block phosphorylation of the native
`Flk1 receptor expressed in endothelial cells.
`plasmid
`Construction
`of
`the
`expression
`plasmids
`pFlt1D2. Flk1D3.FcAC1(a).
`Expression
`pMT21. Flt1(1-3).Fc (6519 bp) and pMT21.Flk-1 (1-3).Fc
`(5230 bp) are plasmids that encode amplicillin resistance and
`Fc-tagged versions of Ig domains 1-3 of human Flt1 and
`human Flk1, respectively. These plasmids were used to con
`struct a DNA fragment consisting of a fusion of Ig domain 2
`of Flt1 with Ig domain 3 of Flk1, using PCR amplification of
`the respective Ig domains followed by further rounds of PCR
`to achieve fusion of the two domains into a single fragment.
`For Ig domain 2 of Flt1, the 5' and 3' amplification primers
`were as follows: 5': bsp/flt1D2 (5'-GACTAGCAGTCCGG
`AGGTAGACCTTTCGTAGAGATG-3') (SEQ ID NO:8), 3':
`Flt1D2-Flk1D3.as (5'-CGGACTCAGAACCACATCTAT
`GATTGTATTGGT3') (SEQID NO:9). The 5' amplification
`primer encodes a BspE1 restriction enzyme site upstream of
`Ig domain 2 of Flt1, defined by the amino acid sequence
`GRPFVEM (SEQID NO:10) corresponding to amino acids
`27-33 of SEQ ID NO:2. The 3' primer encodes the reverse
`complement of the 3' end of Flt1 Ig domain 2 fused directly to
`the 5' beginning of Flk1 Ig domain 3, with the fusion point
`defined as TIID of Flt1 (corresponding to amino acids 123
`126 of SEQ ID NO:2) and continuing into VVLS (SEQ ID
`NO:7) (corresponding to amino acids 127-130 of SEQ ID
`NO:2) of Flk1.
`For Ig domain 3 of Flk1, the 5' and 3' amplification primers
`were as follows:5': Flt1D2-Flk1D3.s (5'-ACAATCATAGAT
`GTGGTTCTGAGTCCGTCTC

This document is available on Docket Alarm but you must sign up to view it.


Or .

Accessing this document will incur an additional charge of $.

After purchase, you can access this document again without charge.

Accept $ Charge
throbber

Still Working On It

This document is taking longer than usual to download. This can happen if we need to contact the court directly to obtain the document and their servers are running slowly.

Give it another minute or two to complete, and then try the refresh button.

throbber

A few More Minutes ... Still Working

It can take up to 5 minutes for us to download a document if the court servers are running slowly.

Thank you for your continued patience.

This document could not be displayed.

We could not find this document within its docket. Please go back to the docket page and check the link. If that does not work, go back to the docket and refresh it to pull the newest information.

Your account does not support viewing this document.

You need a Paid Account to view this document. Click here to change your account type.

Your account does not support viewing this document.

Set your membership status to view this document.

With a Docket Alarm membership, you'll get a whole lot more, including:

  • Up-to-date information for this case.
  • Email alerts whenever there is an update.
  • Full text search for other cases.
  • Get email alerts whenever a new case matches your search.

Become a Member

One Moment Please

The filing “” is large (MB) and is being downloaded.

Please refresh this page in a few minutes to see if the filing has been downloaded. The filing will also be emailed to you when the download completes.

Your document is on its way!

If you do not receive the document in five minutes, contact support at support@docketalarm.com.

Sealed Document

We are unable to display this document, it may be under a court ordered seal.

If you have proper credentials to access the file, you may proceed directly to the court's system using your government issued username and password.


Access Government Site

We are redirecting you
to a mobile optimized page.





Document Unreadable or Corrupt

Refresh this Document
Go to the Docket

We are unable to display this document.

Refresh this Document
Go to the Docket