throbber
J. Dairy Sci. 94:5811-5820
`doi:10.3168/jds.2011-4479
`© American Dairy Science Association®, 2011.
`
`J3-Galactosidase with transgalactosylation activity
`from Lactobacillus fermentum K4
`
`G. X. Liu ,* J. Kong,t W.W. Lu ,t W. T. Kong,t H. Tian,* X. Y. Tian,* and G. C. Huo*1
`*State Key Laboratory of Dairy Science , Northeast Agricultural University, Ministry of Education, No. 59 Mucai Street, Xiangfa ng District, Harbin ,
`Heilongjiang Province , 150030 , China
`tState Key Laboratory of Microbial Technology, Shandong University, No. 27 Shanda South Road , Jinan , Shandong Province , 250100 , China
`
`ABSTRACT
`
`INTRODUCTION
`
`r3-galactosidase of Lactobacillus fer(cid:173)
`The LacLM
`mentum K4 is encoded by 2 consecutive genes, lacL
`(large subunit) and lacM (sm all subunit) , t hat share
`17 overlapping nucleotides. Phylogen etic analysis re(cid:173)
`vealed t hat t his enzyme was closely relat ed to other
`Lactobacillus r3-galactosidases and provided significant
`insight int o its common and distinct characteristics.
`'vVe cloned both the lacL and lacM genes of L . fer(cid:173)
`mentum K4 and het erologously expressed each
`in
`Escherichia coli, although t he recomb inant enzyme was
`only functional when both were expressed on the same
`plasmid. We evaluated t he enzymatic propert ies of this
`species-specific LacLM r3-galactosidase and discovered
`t hat it act s as bot h a hydrolase, bioconverting lactose
`into glucose and galactose, and a transgalactosylase,
`generating pre biot ic galacto-oligosaccharides (GOS).
`The recombinant r3-galactosidase showed a broad pH
`optimum and st ability around neutral pH . The opt imal
`temperature and Michaelis constant (Km) for t he sub(cid:173)
`st rates o- nitrophenyl-
`-D-galactopyranoside and lactose
`were, respectively, 40°C and 45 to 50°C and 1.31 mM
`and 27 mM. The enzyme activity was stimulated by
`some cations such as Na+, K+, and Mg2+. In addit ion ,
`activity was also enhanced by ethanol (15%, wt / vol).
`The transgalactosylation activity of L. f ermentum K4
`-galactosidase effectively and rapidly generated GOS ,
`up t o 37% of t he total sugars from t he reaction . Col(cid:173)
`-galactosidase
`lectively, our results suggest ed that the
`from L . f ermentum K4 could be exploited for the for(cid:173)
`m ation of GOS.
`Key words:
`-galactosidase, Lactobacillus f ermentum,
`lactose, galacto-oligosaccharides
`
`Received April 24, 2011.
`Accepted September 5, 2011.
`1Corresponding author: gchuo58@126.com
`
`The carbohydrate-active enzymes ( CAZymes) are di(cid:173)
`vided among 5 fun ctional classes: glycoside hydrolases
`(GH), glycosylt ransferases , polysaccharide lyases, car(cid:173)
`bohydrat e esterases, and carbohydrate-binding modules
`(Cantarel et al. , 2009) . The r3-galactosidases (~-gal,
`E C 3.2.1.23) belong t o 4 different GH families (GHl ,
`GH2 , GH35, and GH42; htt p: //www.cazy.org/ ) and
`catalyze t he hydrolysis and t he transgalactosylation
`of r3-D-galactopyranoside substrates such as lactose.
`r3-Galactosidases are widely distributed
`throughout
`nature and have been charact erized in animals, plants,
`and microorganism s, including bacteria , fungi, and
`-gal from Escherichia coli has been part icu(cid:173)
`yeast . The
`larly well described because of t he universal application
`of t he lactose operon as a molecular t ool. Furt hermore,
`t he transgalactosylation activity of -galactosidases has
`gained considerable attent ion for its ability to produce
`( G OS) prebiot ics
`galacto-oligosaccharide
`( Ot ieno,
`2010; P ark and Oh, 2010).
`Galacto-oligosaccharides are enym atically produced
`upon lactose conversion , and t hey vary in saccharide
`chain length (between 2 and 8 monomeric units) and
`t he types of linkages between t he units. R ecent ly, how(cid:173)
`ever , certain invariable characteristics were described.
`The saccharide chain is composed of a single terminal
`glucose, galactose monosaccharides, and disaccharides
`comprising 2 galactose units (T zortzis and Vulevic,
`2009) . Ind us t rial processes aimed at producing low(cid:173)
`lact ose or lactose-free items are concerned wit h un(cid:173)
`desirable GOS byproducts , for fear of unknown side
`effects t hat may stimulate symptoms of lactose intol(cid:173)
`erance. However , GOS have demonstrated beneficial
`effects t hat are distinct from lactose. The GOS can
`increase the numbers of B ifidobacterium strains and
`other probiotics (Onishi and Tanaka , 1995; R abiu et
`al. , 2001 ; Rastall and Maitin, 2002; Macfarlane et al. ,
`2008) and contribute t o metabolic activity of colon mi(cid:173)
`crobiota (Knol et al. , 2005) . As such , GOS have been
`proposed as an em erging special class of prebiotics and
`have gained popularity as supplemental components to
`
`581 1
`
`

`

`58 12
`
`LI U ET AL.
`
`Table 1. Bacterial strains and plasmids included in this study
`
`Strain or plasmid
`
`Characteristic1
`
`Strain
`Lactobacillus fermentum K4
`Escherichia coli Origami B (DE3)
`
`Isolated from Chinese traditional dairy products
`F' ompT hsdS8 (r 8' m 8 ') gal dcm lac Yi ahpC(DE3 ) gor522:: Tn 10
`trxB (Kan', Tet'); derived from a LacZY mutant of DE3 and carries
`trxB/ gor mutations for cytoplasmic disulfide bond formation
`
`Source
`
`This work
`ovagen, Germany
`
`P lasmid
`pET-226(+)
`pET Duet-1
`p22bLM
`pDuetL
`pDuetLM
`
`Amp', 5.5 kb, C-terminal His-Tag, T 7 promoter/ lac operator, pelB leader
`Amp' , 5.4 kb, T7 promoter/ lac operator, Co/El replicon, two MCS, His-Tag, S-Tag
`Amp', 8.3 kb, pET 22b( +) derivative with lacLM genes inserted before His-Tag
`Amp', 7.3 kb, pET Duet- 1 derivative with lacL gene inserted after His-Tag
`Amp', 8.2 kb, pET Duet-1 derivative with lacL gene inserted
`after His-Tag and lacM gene inserted before S-Tag
`
`Novagen, Germany
`ovagen, Germany
`This work
`This work
`This work
`
`1Amp' = ampicillin resistant; Kan'= kanamycin resistant ; Tet' = tetracycline resistant ; MCS = multiple clone site.
`
`infant formula powder, wherein t hey replicate t he oli(cid:173)
`gosaccharide effect of human milk (Torres et al. , 2010).
`It is now believed that combining prebiotic GOS wit h
`probiotics in food sources will strongly benefit overall
`human health.
`Lactic acid bacteria (L A B ) are an established and
`crucial component of modern dairy processing and t he
`food industry. The most common species applied are
`from the genera Lactobacillus, Lactococcus, Bifido bac(cid:173)
`terium, and Streptococcus. Lactobacillus fermentum is a
`heterofermentative LAB t hat acts within a broad range
`of environmental niches, including dairy, meat , cereal,
`and vegetable fermentations, and even in the human
`gastrointestinal tract (Walter , 2008). The probiotic
`properties of some L . fermentum strains have been de(cid:173)
`scribed, such as that of t he ME-3 strain, which is also
`considered to elicit a prebiotic effect (Calderon Santoyo
`et al. , 2003; Songisepp et al. , 2004, 2005; Mikelsaar and
`Zilmer, 2009) .
`In recent years, whole-genome sequencing studies of
`LAB model strains have provided signifi cant insights
`into t he molecular mechanisms by which these bacteria
`affect biological processes. The principal objective of
`this study was to investigate the transgalactosylation
`properties of ~-gal from L. fermentum K4. To this end ,
`the LacLM ~-gal was heterologously expressed and the
`recombinant protein purified . The amino acid sequenc(cid:173)
`es of LacLlVI and putative active sites were analyzed ,
`and homology with other GH2 ~-gal from various LAB
`strains was investigated. Our results indicated t hat t he
`~-gal from L. fermentum K4 could be used to yield
`GOS.
`
`MATERIALS AND METHODS
`
`aerobically at 37°C in standard Lactobacillus de Man,
`Rogosa, and Sharpe broth (Difeo, Detroit , MI) con(cid:173)
`taining 2% lactose (wt/ vol) . Escherichia coli Origami
`B (DE3) (Table 1) was grown at 37°C under aeration
`in Luria-Bertani broth, supplemented with 100 µ,g /
`mL ampicillin and 30 µ,g / mL kanamycin for plasmid
`maintenance.
`
`Gene Cloning and Vector Construction
`
`Chromosomal D A was extracted from L . fermen(cid:173)
`tum K4 using the T IANamp bacteria genomic DNA
`extraction kit (Tiangen , Beijing, China). Amplification
`primers for the lacL and lacM genes encoding ~-gal
`were designed according to the complete genome se(cid:173)
`quences of L . fermentum IFO 3956 (GenBank accession
`no. AP008937) and L. f ermentum CECT 5716 (Gen(cid:173)
`Bank accession no. CP002033; Table 2). Amplifica(cid:173)
`tion of t he lacLM genes using Lf22b-F and Lf22b-R
`primers resulted in introduction of (5') Neal and (3')
`Xhol restriction enzyme recognition sites, respectively.
`Likewise, amplification of the large subunit (lacL) gene
`using LfDuetL-F and LfDuetL-R primers introduced
`(5') BamHI and (3') Pstl sites, and amplification of
`the small subunit ( lacM) gene using LfDuet 1-F and
`LfDuetM-R primers introduced (5') Ndel and (3') BglII
`sites.
`Expression vectors pETDuet-1 and pET-22b( +)
`(Novagen , Darmstadt, Germany) were restructured
`with digested P CR products of lacL and lacLM genes,
`respectively, to generate pDuetL and p22bLlVI. Subse(cid:173)
`quently, pDuetL was used to construct the pDuetLM
`plasmid containing t he complete lacLM genes. The
`restructured plasmids (Table 1) were confirmed by re(cid:173)
`striction enzyme digestion and sequencing.
`
`Bacterial Strains and Culture Conditions
`
`Expression and Purification
`
`Lactobacillus ferm entum strain K4 (16S rDI A Gen(cid:173)
`Bank accession no . EU621 85 1; Table 1) was grown an-
`
`The recombinant plasmids p22bLM, pDuetL, and
`pDuetLM were transformed into E. coli Origami B
`
`Journal of Dairy Science Vol. 94 No. 12, 201 1
`
`

`

`~-GALACTOSIDAS E OF LA CTOBAC/LLUS FERMENTUM
`
`5813
`
`Table 2. Sequences of the primers used in this study
`
`Primer
`
`Lf22b-F
`Lf22b-R
`LilluetL-F
`LilluetL-R
`LilluetM-F
`LilluetM-R
`
`Target
`fragment
`
`lacLM
`
`lacL
`
`lacM
`
`Annealing
`temperature (°C)
`
`61
`
`60
`
`58
`
`Size
`(bp)
`
`2,838
`
`1,887
`
`975
`
`Restriction
`enzyme
`
`Sequence' (5' to 3')
`
`Neal
`Xhol
`BamHI
`Pstl
`Ndel
`BglII
`
`GCACCATGGAAGCAGAGCTGAAATG
`TAGCTCGAGGTTAAGCTCGGGCAC
`GGTGGATCCTATGGAAGCAGAGCTGA
`GCGCTGCAGTTTGTGTAATCCATAGT
`GCTCATATGGATTACACAAATAAGCTG
`TTGAGATCTGTTAAGCTCGGGCAC
`
`'Restriction enzyme sites are underlined.
`
`(DE3) for expression. The transformants were grown at
`37°C in antibiotic-supplemented Luria Bertani medium
`with shaking until an optical density of 0.5 at 600 nm
`was reached. Isopropyl-~-D-thiogalactoside (IPTG , 1
`mM) was then added to the culture medium and in(cid:173)
`cubation continued at 25°C for 12 h . The induced cells
`were then harvested by centrifugation at 12,000 x g for
`10 m in at 4°C.
`The cell pellet was suspended with 50 mM sodium
`phosphate buffer (pH 6.5) and disrupted by sonication,
`after which the cell debris was pelleted by centrifugation
`(16,000 x g for 30 min at 4°C). The supernatant was
`t hen applied to a His-Trap HP column (GE Healthcare,
`Uppsala , Sweden) that had been pre-equilibrated with
`buffer A (20 mM sodium phosphate, 0.5 M NaCl, 20
`mM imidazole, pH 7.4). Nonspecific adsorbed materi(cid:173)
`als were removed by washing with buffer B (20 mM
`sodium phosphate, 0.5 M NaCl, 40 mM imidazole, pH
`7.4). The recombinant ~-gal was eluted with elution
`buffer (20 mM sodium phosphate, 0.5 MN aCl, 500 mM
`imidazole, pH 7.4). The active fractions were desalted
`and collected by ultrafiltration with Amicon Ultra-4
`(Niillipore, Billerica, MA). The concentration of protein
`was determined by t he Bradford method using BSA as
`standard (Bradford, 1976). T he expression level and
`purity of recombinant
`-gal were evaluated by resolu(cid:173)
`t ion by 12o/c SDS-PAGE and compared with a protein
`molecular weight marker (TaKaRa, Shiga, J apan ) after
`visualization with Coomassie Brilliant Blue staining.
`
`Enzyme Assays
`
`~-Galactosidase activity was determined using
`o-nitrophenyl-~-D-galactopyranoside ( oNPG) and lac(cid:173)
`tose as the substrates. The oNPG reaction was carried
`out in 100 µL of 50 mM sodium phosphate buffer (pH
`6.5) containing 40 µL of 20 mM o PG and 10 µL of
`diluted enzyme solution. After 10 min of incubation at
`reaction temperature, 100 µL of 1 M
`a.:iCO 3 was added
`to terminate the reaction. Activity of ~-gal was deter(cid:173)
`mined by the amount of o-nitrophenol ( oNP) released,
`
`as measured by absorbance at 405 nm on a microplate
`reader (Bio-Rad Laboratories, Hercules, CA). One unit
`of o IPG activity was defined as the amount of enzyme
`releasing one micromole of oNP per minute under the
`described conditions.
`The lactose substrate reaction was initiated by add(cid:173)
`ing 50 µL of diluted enzyme solution to 150 µL of 50
`mM sodium phosphate buffer (pH 6.5) with 200 mM
`lactose. After 10 min of incubation at reaction temper(cid:173)
`ature, the reaction was stopped by heating at 100°C for
`5 min. Activity of ~-gal was determined by measuring
`the amount of D-glucose released using a commercially
`available glucose oxidase kit (Biosino, Beijing, China)
`and reading absorbance at 490 nm. One unit of lactase
`activity was defined as t he amount of enzyme releasing
`one micromole of D-glucose per minute under the given
`conditions .
`
`Characterization of the Recombinant {3-ga/ Enzyme
`
`pH and Temperature D ependence of Activity
`and Stability. Both oNPG and lactose assays were
`variably performed so as to determine the optimum
`pH and temperature of the respective enzyme activity.
`The optimum pH was determined for the range of pH
`from 2.5 to 11.0 by using 50 mM Mcllvaine buffer (pH
`2.5- 5.5), 50 mM sodium phosphate buffer (pH 5.5- 8.0) ,
`or 50 mM glycine-NaOH buffer (pH 8.5- 11.0). The
`optimum temperature was determined by measuring
`the respective enzyme activity over a range from 20 to
`70°C (J uajun et al. , 2011). All other assay condit ions
`remained unchanged.
`The release of oNP from o IPG was measured to
`determine pH and thermal stability. For determination
`of pH stability, the enzyme samples were diluted with
`buffers of various pH values and incubated at 4°C for 3
`d . Temperature stability was determined by incubating
`at various temperatures in a range from 4 to 55°C for
`more than 120 min. The samples were separated at
`the desired t ime intervals, and the residual activity was
`measured under standard assay conditions .
`
`Journal of Dai ry Science Vol. 94 No. 12, 2011
`
`

`

`5814
`
`A
`
`0825581
`ilus AV 32871
`L.
`L.
`Iv cu IADX6'98 21
`L. johnsonilJE J598 81
`L. plant ru CAD655691
`L. sak 1ICAl560 81
`L. elbr
`11IAC 069861
`18088 I
`nu
`727 501
`I
`L. sahvartusjADJ7,86
`I
`S. thermo
`ilus AV6 0
`L. r
`nos us CA 8'63651
`IS A1 060781
`. la
`. cohl:BAl538551
`Cons ns
`
`B
`
`LI U ET AL.
`
`AG
`AG
`AG
`AG
`G
`G
`G
`
`3
`!l
`1S
`
`G
`G
`
`G
`G
`G
`G
`G
`G
`
`(a)
`
`(b)
`
`F igure 1. Multiple alignments of the possible active sites (A) and conservative frequency (B) of ~-galactosidases of different species (genera:
`L. = Lactobacillus spp., B. = Bifidobacterium spp., S. = Streptococcus spp. , and E. = Escherichia) . GenBank accession numbers follow the spe(cid:173)
`cies names. Conserved catalytic amino acids proposed to be the key residues in the active sites are indicated with black arrows. Color version
`available in the online PDF.
`
`D etermination of Kin et ic Parameters. Kinetic
`parameters were evaluated by performing t he oNPG
`and lactose assays at 30°C using 50 mN[ sodium phos(cid:173)
`phate buffer (pH 6.5) with substrate concentrations
`ranging from 0.5 to 22 mM for oNPG and from 1 to
`600 mM for lactose (Nguyen et al. , 2006) .
`Effect of Various Cations and R eagents. To
`study the effect of various cations and reagents on t he
`activity of ~-gal, t he enzyme samples were assayed with
`aqueous solution containing 20 mM oNPG at the opti(cid:173)
`mum temperature for 10 min in the presence of various
`cations and reagents added at a final concentration of 5
`mM, or at 15% (vol/ vol) for ethanol and glycerol. T he
`measured activities were compared with the activity
`
`of the enzyme solution under t he same condit ions but
`without added cations or reagents.
`
`Formation of GOS
`
`Cell extracts were incubated for 48 h at 45°C in
`50 mM sodium phosphate buffer (pH 6.5) with either
`lactose solut ion (20% or 40%, wt / vol) or milk conta in(cid:173)
`ing 5% (wt/ vol) lactose , respectively. Samples were
`withdrawn at certa in time intervals and immediately
`heated at 100°C for 5 m in to inactivate the enzyme.
`The composit ions of GOS mixtures were analyzed us(cid:173)
`ing t hin-layer chromatography (TLC ) and an HPLC
`system . The T LC was carried out on silica-gel 60 plates
`
`Journal of Da iry Science Vol. 94 No. 12, 2011
`
`

`

`~-GALAC TOSI DAS E OF LACTOBAC/LL US FERMENTUM
`
`5815
`
`7
`
`8
`
`5
`
`8
`
`8
`
`10
`
`Lael
`
`Lacz
`
`L crispatus ST1 ICBL50863I
`L. amy/ovorus GRL 11121ADQ59581 I
`L. ullunensis DSM 160471EEJ728361
`L. acidophilus NCFMIAA V432871
`L. he/veticus H1 0IADX698421
`L. johnsonii ATCC 332001EEJ59848I
`L. reuteri DSM 200161ABQ825581
`L. vagina/is ATCC 495401EEJ408451
`L. oris PB013-T2-31EFQ529731
`L. antri DSM 160411EEW526881
`1~ - - • L. fermentum K4
`L. coleohominis 101-4-CHN 1EEU296641
`L. brevis subsp. gravesensis ATCC 27305 1EE1714751
`2 11---1-0~ L buchneri ATCC 11577 1EEl200031
`10 L. hilgardii ATCC 8290 IEEl231471
`L plantarum WCFS1 ICA0655691
`L. coryniformls IABD966101
`Pediococcus pentosaceus A TCC 257 45IABJ673061
`Pediococcus acidi/actici DSM 202841EFL960501
`L. sakei subsp. sakei 23KICAl560181
`_. _ . _ . _ . _ . _ . _ . 4 . _.._ __ - . -_-.--WJV~~/liLJ)a!clfIJP}iIVltf:.roiIJ.f:Ui u;c..;3.ll1 ~ER"l!4~l- . _ . _. _ . _ . _
`C/ostridium perfringens C s1r. JGS14951EDS793891
`L. salivarius CECT 5713IADJ78641 I
`- - - - Paenibacil/us polymyxa SC21ADO54271 I
`1 . . . . - - - Bacillus halodurans C-1251BAB064421
`- - - Geobacillus sp. Y412MC61 1ACX772161
`- - - - L. ruminis ATCC 256441EFZ33771 1
`Streptococcus thermophilus LMG 18311 fAA V61011 I
`L. delbrueckii subsp. /actis DSM 200721EGD281381
`1 o L. delbrueckii subsp. bulgaricusfACE069861
`.----- Bifidobacterium breve DSM 202131EFE886541
`Bifidobacterium adolescentis ATCC 157031BAF403861
`- - - Bifidobacterium longum subsp. inrantis ATCC 558131EEl80881 I
`1 o Bifidobacterium longum subsp. /ongum JCM 1217fBAJ671531
`, - - - - - Escherichia coli SE151BAl538551
`Leuconostoc kimchii IMSNU 111541ADG39689f
`- - - - Lactococcus lactis subsp. lactis ll14031AAK060781
`.---- Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293fABJ624121
`Leuconostoc gasicomitatum LMG 18811 ICBL912091
`L. casei BL231CAQ654171
`1 o
`L. rhamnosus GG ICAR86231 I
`
`....._.
`0.1
`
`Figure 2. Phylogenetic tree of ~-galactosidase from some lactic acid bacteria (where L. = Lactobacillus). Lactobacillus fermentum K4 is
`marked with a black circle. GenBank accession numbers follow the species names. The ~-galactosidases above the dotted line pertain to the
`LacLM type, and those below the dotted line pertain to t he LacZ type, except the ~-galactosiclases of glycoside hyclrolase group (GH)42 from
`Lactobacillus rhamnosus GG and Lactobacillus casei BL23 .
`
`(Merck, Darmstadt, Germany) in a solvent composed
`of n-butanol:n-propanol:ethanol:water (2:3 :3 :2, vol/
`vol/ vol/ vol), as described previously (Splechtna et
`al. , 2006 ) . For further analysis of GOS , the samples
`were diluted appropriately, filtered , and injected into
`the HPLC system on a column of Aminex HPX 87H
`(Bio-Rad Laboratories) at 50°C using 5 mM H 2SO4
`solution as t he mobile phase (0.3 m L / min) and refrac(cid:173)
`tive index detection. The yield of GOS was calculated
`by the previously described method (J ¢rgensen et al. ,
`2001) .
`
`Nucleotide Sequence Accession Numbers
`
`The genes of lacL and lacNI were submitted to the
`GenBank database under accession numbers HQ727550
`and HQ727551, respectively.
`
`RESULTS
`
`Sequence Analysis of /3-gal from L. fermentum K4
`
`The L . f ermentum K4 genome sequences of lacL and
`lacM share an overlapping region of 17 nucleotides.
`
`Journal of Dairy Science Vol. 94 No. 12, 20 11
`
`

`

`58 16
`
`KDa
`116 _
`97_2 -
`66.4-
`
`44.3 -
`
`29.0 -
`
`20.1-
`
`Figure 3 . Sodium dodecyl sulfate-PAGE analyses of !3-galactosidase
`(LacLM) from Lactobacillus fermentum K4 expression in Escherichia
`coli Origami B (DE3) . Lane 1 = protein molecular weight marker; lane
`2 = cells of E. coli Origami B (DE3) ; lane 3 = cells of E. coli con(cid:173)
`taining p22bLM without induction; lanes 4 and 5 = cells grown with
`pD uetL (lane 4) and p22bLM (lane 5) for 12 h with 1 mM isopropyl-
`13-D-thiogalactoside induction, respectively; lane 6 = purified protein
`of !3-galactosidase LacLM.
`
`Sequence alignment by the basis local alignment tool
`(http: //blast .ncbi.nlm.nih.gov/ Blast.cgi) revealed that
`these 2 genes have 99.81 % identity to t hose published
`from L. fermentum strains IFO 3956 and CECT 5716.
`Based on the deduced amino acid sequences of the
`~-gal large subunit LacL and small subunit LacM, the
`theoretical molecular weights were estimated to be
`72.29 and 35.8 kDa, respectively (http ://au.expasy.
`org/ tools/ pi_tool.html). The L. fermentum K4 ~-gal
`resembles the GH2 family members that are classified
`as LacLM type as opposed to Lacz type (Schwab et
`al. , 2010). The potential active sites in L. fermentum
`K4 LacLM were identified by comparison with those
`defined for the other major LAB by using the CLC
`sequence viewer (F igure lA) and WebLogo (F igure lB ;
`htt p: //weblogo.berkeley.edu/ logo.cgi). The E. coli Lac Z
`acid/ base and nucleophile regions are located at resi(cid:173)
`dues Glu461 and Glu537 (Cupples et al. , 1990; , Gebler
`et al. , 1992 ; Henrissat and Bairoch, 1993; Hung et al. ,
`2001; l\!Iatthews, 2005). These regions were located in
`L. fermentum K4 LacLM at Glu466 (Figure lBa) and
`Glu534 (Figure lBb) and exhibited remarkably high
`identity with the corresponding ones from E. coli Lacz.
`However, when the entire AA sequence of L. fermentum
`K4 LacLM was compared with that of E. coli LacZ,
`only 31.66% ident ity was observed.
`Phylogenetic t rees were constructed for LacL and
`LacM of L . fermentum K4 using MEGA 5 software
`(www.megasoftware.net) with the bootstrap method
`and using all of the putative ~-galactosidases discov(cid:173)
`ered thus far in Lactobacillus spp. and some of t he LAB
`strains that are prevalent in food manufacturing. Fig(cid:173)
`ure 2 shows the LacL phylogenetic t ree of L. fermentum
`
`Journal of Dairy Science Vol. 94 No. 12, 201 1
`
`2
`
`3
`
`4
`
`5
`
`6
`
`LI U ET AL.
`
`A 100
`
`•
`•
`
`2
`
`3
`
`4
`
`5
`
`6
`
`7
`pH
`
`8
`
`9
`
`10 11
`
`12
`
`,......_
`::R
`
`80
`
`0 ->-- 60
`
`">
`:;:;
`t) ro 40
`Q)
`>
`:;:; ro 20
`Q)
`0:::
`
`0
`
`B 100
`
`,......_ 80
`::R
`
`0 ->--·s: 60
`
`:;:;
`t) ro
`Q) 40
`>
`:;:;
`ro
`Q)
`0::: 20
`
`0
`
`20
`
`30
`
`60
`50
`40
`Temperature (°C)
`
`70
`
`80
`
`Figure 4. pH (A) and temperature (B) optima of !3-galactosidase
`from
`using
`0-nitrophenyl-!3-D(cid:173)
`f ermentum K4
`Lactobacillus
`galactopyranoside (black circles) and lactose (gray circles) as t he sub(cid:173)
`strates, respectively. For a ll the graphs, the values are the mean of 3
`determinations.
`
`K4 . Both LacL and LacM (data not shown) were most
`closely related to the ~-gal from other Lactobacillus spp.
`
`Expression of {3-ga/ from L. fermentum in E. coli
`
`The ~-gal LacLM from L. fermentum K4, which
`is encoded by the lacLM operon, was amplified and
`cloned into pET-22b( + ), resulting in t he p22bLlVI ex(cid:173)
`pression vector. To study the detailed characteristics
`of this strain-specific
`-gal, t he large subunit gene
`lacL was cloned and expressed as an IPTG-inducible
`recombinant protein ( as described in Materials and
`Methods). Sodium dodecyl sulfate-PAGE analysis
`of t he ~-gal samples at various steps of the expres-
`
`

`

`~-GALACTOS IDASE OF LA CTOBAC/LLUS FERMENTUM
`
`581 7
`
`A 100
`
`- 80
`~ 0 ->. 60
`
`....,
`·;;
`:.::;
`(.)
`ro
`Q)
`>
`:.::;
`ro
`Q)
`0:::
`
`.
`,,
`
`-
`
`40
`
`20
`
`0
`
`.---•
`'
`
`I
`I
`
`I
`I
`I
`
`.. ,
`
`4
`
`5
`
`6
`
`7
`
`8
`
`pH
`
`...
`
`9
`
`10
`
`11
`
`B 100
`
`- 80
`
`~
`.._..
`0
`....,
`>,
`·;;
`:.::;
`(.)
`ro
`Q)
`>
`:.::;
`ro
`Q)
`0:::
`
`60
`
`40
`
`20
`
`0
`
`----~
`
`.
`
`I
`I
`I
`I
`I
`I
`I
`I
`I
`
`..
`
`.
`
`-~ ,
`'
`
`..........
`...... ,
`
`' •,
`' ~ -
`
`10
`
`40
`20
`30
`Temperature (°C)
`
`50
`
`60
`
`F igure 5. pH (A) and temperature (B) stability of f3-galactosidase
`from Lactobacillus fermentum K4. The enzyme was incubated for dif(cid:173)
`ferent periods: A: 24 h (black circles), 48 h (gray circles), 72 h (gray
`t riangles); B: 20 min (black circles), 40 min (gray circles), 100 min
`(gray triangles). For all graphs, the values are the mean of 3 determi(cid:173)
`nations.
`
`sion and purification process are shown in F igure 3.
`The purified recombinant LacLM consisted of a large
`subunit and a small subunit , which were estimated to
`b e approximately ~ 72 and 35 kDa, respectively (lane
`6). The large subunit LacL, which was encoded by the
`lacL gene from vector pDuet L, was expressed (lane 4)
`wit h no activity. However, the whole protein LacLM
`encoded by t he recombinant plasmid pDuetLNI ( and
`generated by insert ing the lacM gene before t he S-t ag
`of pDuetL) was active.
`
`Properties of /3-ga/
`
`T he opt imal pH of ~-gal LacL ti were determined to
`be pH 6. 5 and 7.0 for lactose and oNPG substrates,
`
`respectively (F igure 4A). The enzyme exhibited very
`low activity outside the range of pH from 5.5 to 8.5.
`Optimum temperature was 40°C for the t ransgalac(cid:173)
`t osylation activity wit h oNP G (Figure 4B) and 45 t o
`50°C for lactose hydrolysis. The kinetic parameters Km
`(Michaelis const ant) and V.nax (maximum rate) of t he
`purified enzyme were determined t o be approximat ely
`1.31 mM and 184.4 µm ol·min- 1-mg- 1 for oNPG , and
`27 mM and 41 µm ol·min- 1-mg- 1 for lactose hydrolysis.
`T he purified recombinant ~-galact osidase protein
`was determined to be more st able at pH 8.0 after 3 cl of
`incubation at 4°C (Figure 5A) , which was distinct from
`t he optimal pH. T he protein was also found to ret ain
`about 40% of its enzyme activity in neut ral pH after
`incubation for 72 h. Thermal st ability was observed in
`t he range of 10 to 20°C (Figure 5B) , and 35 to 50%
`of the maximum act ivity was ret ained after incubation
`in t he temperature range for 2 cl (dat a not shown).
`Incubation at 55°C inactivated the enzyme wit hin 20
`min (Figure 5B).
`
`Effect of Various Cations and Reagents
`
`T he activity of L. fermentum K4 recombinant ~-gal
`was enhanced upon exposure to 15% (wt/ vol) ethanol
`and 5 mM Na+, K +, and
`tlg2+ (Figure 6). The reagent
`dithiothreitol had almost no effect on enzymatic activ(cid:173)
`ity. The activity was moderately inhibited by glycerol,
`2-mercapt oethanol, and urea, and was clearly inhibited
`by Fe2+, Mn2+, and Zn 2+. Glutathione, Cu2+, and Fe3+
`complet ely deactivated t he enzyme. Thus, the cations
`K+ and Mg2+ were considered and applied as cofactors
`to enhance the efficiency of L. fermentum ~-gal.
`
`Bioconversion of Lactose
`
`Certain microbial ~-gal can mediate the transfer of
`t heir hydrolyzed galactose products ont o lactose t o
`yield GOS (P anesar et al. , 2006; Park and Oh, 2010).
`-gal LacLM from L. fermentum K4 exhibits such
`The
`transgalact osylation activit ies . During lactose conver(cid:173)
`sion, we observed that t he transgalactosylation reaction
`was rapidly init iated , as demonstrated by the formation
`of GOS in 0. 5 h (Figure 7 A). The weight of GOS as a
`percentage of the total sugars in the reaction mixture
`was determined by HP LC. The value reached a maxi(cid:173)
`mum of 37% when the incubation involving 50 mM so(cid:173)
`dium phosphat e buffer (pH 6. 5) at 45°C with 40o/c (wt /
`vol) lactose solution was extended to 9 h. Beyond 9 h,
`however , hydrolysis prevailed over t ransgalactosylation,
`and the total amounts of GOS trended downwards, ac(cid:173)
`companied by an increase in galactose content (Figure
`7B). When a lower lactose content solut ion was used
`(as in milk), t he amount of bioconverted GOS was less.
`
`Jou rn al of Dairy Science Vol. 94 No. 12, 20 11
`
`

`

`5818
`
`LI U ET AL.
`
`Glutathione
`Cu2+
`Fe3+
`Fe2+
`Zn2+
`Mn2+
`Glycerol
`Ethanol
`EDTA
`Urea
`OTT
`2 me
`Ca2+
`Mg2+
`K+
`Na+
`Control
`
`0
`
`150
`100
`50
`Relative activity (%)
`
`200
`
`Figure 6. Effect of various cations and reagents on the activity of i3-galactosiclase from Lactobacillus f ermentum K4. DTT = clith..iothreitol.
`
`Likewise, as the lactose concentration was increased
`in the reaction solution, more and larger GOS were
`produced (Figure 7). This result was consistent with
`that from a previous report (Albayrak and Yang, 2002).
`
`DISCUSSION
`
`-gal from L. f ermentum strain K4 was cloned,
`The
`expressed , purified, and analyzed to determine its dis(cid:173)
`tinctive enzymatic properties and indicate its poten(cid:173)
`tial as a manipulable molecular tool for bioconversion
`of GOS. The recombinant
`-gal showed a broad pH
`optimum and stability around neutral pH (6 .5-8.5) ,
`preferably utilized lactose between 45 and 50°C , and
`was quickly inactivated at 55°C. The cations Na+, K+,
`and Mg2+ improved enzymatic activity, consistent with
`findings from previous studies on other LacLM-type
`~-gal (Nguyen et al. , 2006 , 2007; Iqbal et al. , 2010).
`The effect of Mn2+ was especially noteworthy, because
`it increases ~-gal activity from both L . f ermentum
`K4 and Lactobacillus plantarum WCFSl (Iqbal et al. ,
`2010) , but inhibits that from Lactobacillus acidophilus
`
`Journal of Dairy Science Vol. 94 No. 12, 201 1
`
`(Nguyen et al. , 2007) . Another interesting finding was
`that ethanol was a stimulator of ~-gal LacLM enzyme,
`a finding yet to be reported with any other of the LAB .
`This m ay be a reflection of the relatively broad range of
`environmental niches in which L. f ermentum is known
`to function; it is possible that a symbiotic relationship
`evolved with other ethanol-producing strains, such as
`Saccharomyces cerevisiae or Zymomonas mobilis. In ad(cid:173)
`dit ion, t he types and total amounts of GOS t hat were
`produced by the L. fermentum LacLIVI were mediated
`by the concentration of lactose solution, not the tem(cid:173)
`perature or pH.
`The ~-gal enzyme is known to catalyze the hydro(cid:173)
`lysis and transglycosylation of its substrates through
`a double-displacement reaction involving both galacto(cid:173)
`sylation and degalactosylation steps (Bras et al. , 2010).
`The preference for transglycosylation activity can be
`enhanced by exposure to high concentrations of lactose,
`as demonstrated by measuring the difference between
`glucose and galactose products that arise from specific
`reaction conditions. In our study, we observed that the
`greatest yield of GOS was achieved when the differ-
`
`

`

`~-GALACTOSIDAS E OF LA CTOBAC/LLUS FERMENTUM
`
`5819
`
`A
`
`Glucose
`Galactose
`
`Lactose
`
`GOS
`
`E D
`
`0
`(II ~ ~
`~ ~ ~
`
`D E
`
`B
`
`A
`
`B
`
`C
`
`:-0----o
`• -
`--o---o
`
`--·-
`
`3 6 9 12
`
`36
`30
`24
`18
`Reaction time (h)
`
`42 48
`
`Figure 7. Thin layer chromatography (A) and HPLC (B) analysis
`of transgalactosylation products. (A) A = milk substrate; B = 20%
`lactose solution ; C = 40% lactose solution; D = standard substance;
`E = commercial galacto-oligosaccharides (GOS) . (B) T he enzyme was
`incubated in 50 mM sodium phosphate buffer (pH 6.5) at 45°C with
`40% (wt/ vol) lactose solution: lactose (0 ), galactose (■) , glucose (• )
`and GOS (e ). For all graphs, the values are the mean of 3 determina(cid:173)
`t ions.
`
`ence value was greatest . Fort unat ely, the recombinant
`LacLM was able to bioconvert GOS from milk lactose
`(which exist s at very low concentrations) .
`As mentioned above, the ~-gal from L. f erm entum
`K4 is composed of a large subunit (LacL) and a small
`subunit (LacM) and belongs to the GH2 family of car(cid:173)
`bohydrate-active enzymes. Most Lactobacillus st rains
`contain the LacLM type ~-gal, and some LAB that
`are involved in fermentation (particularly in t he food
`
`industry) pertain to the LacZ type, such as Bifidobac(cid:173)
`terium spp. , Lactococcus spp. , and Streptococcus spp.
`(Hung et al. , 2001 ; J 0rgensen et al. , 2001 ; Hung and
`Lee, 2002 ; Lamoureux et al. , 2002 ; Hsu et al. , 2007) .
`Phylogenetic analysis revealed that both the large sub(cid:173)
`unit LacL and small subunit LacM of L. fermentum K4
`~-galactosidase had high homology wit h most of the
`~-galactosidase from other Lactobacillus spp. It should
`be noted that t he probiot ic Lactobacillus rhamnosus
`CG contains the
`-gal ebgA (CAR86365) and bgaC
`(CAR86231 ) , which belong to GH2 and GH42 , respec(cid:173)
`tively, which is distinct from the other Lactobacillus
`-gal from t he genus Pediococcus
`spp .. Furthermore,
`were also represented in the LacLM group. In general,
`4 subgeneric groups were g

This document is available on Docket Alarm but you must sign up to view it.


Or .

Accessing this document will incur an additional charge of $.

After purchase, you can access this document again without charge.

Accept $ Charge
throbber

Still Working On It

This document is taking longer than usual to download. This can happen if we need to contact the court directly to obtain the document and their servers are running slowly.

Give it another minute or two to complete, and then try the refresh button.

throbber

A few More Minutes ... Still Working

It can take up to 5 minutes for us to download a document if the court servers are running slowly.

Thank you for your continued patience.

This document could not be displayed.

We could not find this document within its docket. Please go back to the docket page and check the link. If that does not work, go back to the docket and refresh it to pull the newest information.

Your account does not support viewing this document.

You need a Paid Account to view this document. Click here to change your account type.

Your account does not support viewing this document.

Set your membership status to view this document.

With a Docket Alarm membership, you'll get a whole lot more, including:

  • Up-to-date information for this case.
  • Email alerts whenever there is an update.
  • Full text search for other cases.
  • Get email alerts whenever a new case matches your search.

Become a Member

One Moment Please

The filing “” is large (MB) and is being downloaded.

Please refresh this page in a few minutes to see if the filing has been downloaded. The filing will also be emailed to you when the download completes.

Your document is on its way!

If you do not receive the document in five minutes, contact support at support@docketalarm.com.

Sealed Document

We are unable to display this document, it may be under a court ordered seal.

If you have proper credentials to access the file, you may proceed directly to the court's system using your government issued username and password.


Access Government Site

We are redirecting you
to a mobile optimized page.





Document Unreadable or Corrupt

Refresh this Document
Go to the Docket

We are unable to display this document.

Refresh this Document
Go to the Docket