`(PATENT)
`
`IN THE UNITED STATES PATENT AND TRADEMARK OFFICE
`
`In re Patent Application of:
`John C. Byrd, efal.
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`Application No.: 14/523,650
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`Confirmation No.: 1095
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`Filed: October 24, 2014
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`Art Unit: 1629
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`For: METHODS OF TREATING AND
`PREVENTING GRAFT VERSUS HOST
`DISEASE
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`Examiner: TRAN, My Chau T.
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`AMENDMENT AND RESPONSE
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`MS Amendment
`Commissioner for Patents
`P.O. Box 1450
`Alexandria, VA 22313-1450
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`DearSir:
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`In response to the pending Office Action, dated April 22, 2016,
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`in connection with the
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`above-referenced application, Applicant submits this Response. Please amend the application as
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`follows.
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`Amendments to the Claims begin on page2.
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`Remarksbegin on page 6.
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`Application No. 14/523,650
`Amendment and Response
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`IN THE CLAIMS:
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`2
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`Docket No.: PIR-88501
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`1.preventinecceurrence-of(Currently amended) A methodoftreating thegraft versus
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`host disease (GVHD), or reducing the severity of GVHD occurrence,in a patient having chronic
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`GVHD fequitine-cel-transplantatier, comprising administering to the patient a therapeutically
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`effective amount of a compound of Formula (A) havingthe structure:
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`Rx, Re
`N
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`R,
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`NOSox
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`N~
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`~N
`Ry
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`Formula (A);
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`wherein:
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`Ais N;
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`R, is phenyl-O-phenyl or phenyl-S-phenyl];
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`R» and R; are independently H;
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`Ry is L3-X-L4-G, wherein,
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`L;3 is optional, and whenpresentis a bond, optionally substituted or unsubstituted alkyl,
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`optionally substituted or unsubstituted cycloalkyl, optionally substituted or unsubstituted alkenyl,
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`optionally substituted or unsubstituted alkyny];
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`X is optional, and whenpresentis a bond, -O-, -C(=O)-, -S-, -S(@O)-, -S(@@O),-, -NH-,
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`
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`-NRo-, -NHC(O)-, -C(O)NH-, -NRoC(O)-, -C(O)NRo-, -S(=O)2NH-, -NHS(=O)-, -S(=O)2NRo-,
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`-NR»S(=O)2-, -OC(O)NH-, -NHC(O)O-, -OC(O)NRo-, -NR9C(O)O-, -CH=NO-, -ON=CH-,
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`-NRioC(O)NRuo-, heteroaryl-, aryl-, -NRioC(=NRi1)NRuo-, -NRioC(=NRi1)-, -C(=NRi)NRio-,
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`-OC(=NRj,)-, or -C(=NR11)O-;
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`L4 is optional, and whenpresentis a bond, substituted or unsubstituted alkyl, substituted or
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`unsubstituted cycloalkyl, substituted or unsubstituted alkenyl, substituted or unsubstituted alkynyl,
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`Application No. 14/523,650
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`Docket No.: PIR-88501
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`substituted or unsubstituted aryl, substituted or unsubstituted heteroaryl, substituted or unsubstituted
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`heterocycle;
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`or L3, X and Ly, taken together form a nitrogen containing heterocyclic ring;
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`O
`Rs
`5
`OQ, 0 Re
`Oy ABx 1
`Re
`; %
`S.
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`Re
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`R7 i
`;
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`O
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`Re
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`Re
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`O
`RO
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`Rz
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`, or
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`Re
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`Re
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`Rz
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`Gis
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`, wherein,
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`Re, R7 and Rs are independently selected from among H, halogen, CN, OH,substituted or
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`unsubstituted alkyl or substituted or unsubstituted heteroalkyl or substituted or unsubstituted
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`cycloalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl,
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`substituted or unsubstituted heteroaryl;
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`each Ro is independently selected from among H, substituted or unsubstituted loweralkyl,
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`and substituted or unsubstituted lower cycloalkyl;
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`each Rio is independently H, substituted or unsubstituted lower alkyl, or substituted or
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`unsubstituted lower cycloalkyl; or
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`two Rio groups can together form a 5-, 6-, 7-, or 8-membered heterocyclic ring; or
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`Rip and Rj; can together form a 5-, 6-, 7-, or 8-membered heterocyclic ring; or
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`each Ry, is independently selected from H orsubstituted or unsubstituted alkyl; or a
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`pharmaceutically acceptable salt thereof,
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`thereby treating thepreventinsthe-occurrence-of graft versus host disease (GVHD)or
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`reducing the severity of GVHD occurrencein the patient.
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`2.
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`3.
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`(Canceled)
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`(Original) The method of claim 1, wherein L3, X and Ly, taken together form a nitrogen
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`containing heterocyclic ring.
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`4.
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`(Original) The method of claim 3, wherein the nitrogen containing heterocyclic ring is
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`a piperidine group.
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`Docket No.: PIR-88501
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`(Original) The methodof claim 1, wherein G is
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`on DA
`Re or
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`Re
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`(Original) The method of claim 1, wherein the compound of Formula (A) is 1-[(3R)-3-
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`5.
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`6.
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`[4-amino-3-(4-phenoxypheny])pyrazolo[3,4-d]pyrimidin-1-yl ]piperidin-1-yl]prop-2-en-1-one.
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`7.
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`(Currently amended) The method of claim 1, wherein the chronic GVHD is
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`sclerodermatous GVHD,steroid resistant GVHD, cyclosporin-resistant GVHD,refractory GVHD,
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`oral GVHD,ehrente oral GVHD,reticular oral GVHD, erosive GVHD,or ulcerative oral GVHD.
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`8.
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`(Currently amended) The method of claim 1, wherein the chronic GVHD is
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`sclerodermatous GVHD.
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`9.
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`(Currently amended) The method of claim 1, wherein the chronic GVHD is steroid
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`resistant GVHD.
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`10.
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`(Original) The method of claim 1, wherein the patient has chronic lymphocytic
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`leukemia (CLL).
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`11.
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`(Currently amended) The method of claim 1, wherein the patient had eet
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`transplantatterns a hematopoietic cell transplantation.
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`12.
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`(Canceled)
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`13.
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`(Canceled)
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`14.
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`(Canceled)
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`15.
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`(Original) The method of claim 1, wherein the compound of Formula (A)is
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`administered at a dosage of between about 0.1 mg/kg per day to about 100 mg/kg perday.
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`16.
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`(Currently amended) The method of claim 1, wherein the amountof the compound of
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`Formula (A) administered is about 40 mg/day, about 140 mg/day, about 280 mg/day, about
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`420 mg/day, about 560 mg/day, or about 840 mg/day.
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`17.
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`(Canceled)
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`18.
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`(Original) The method of claim 1, wherein the compound of Formula (A)is
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`administered orally.
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`19.
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`(Withdrawn) The methodof claim 1, wherein the compound of Formula (A)is
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`administered in combination with one or more additional therapeutic agents.
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`20.
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`(Withdrawn) The methodof claim 19, wherein the additional therapeutic agentis a
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`corticosteroid, cyclosporine (CSA), mycophenolate mofetil (MMF), or a combination thereof.
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`21.
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`(New) A method oftreating chronic graft versus host disease (GVHD) comprising
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`administering to a patient having chronic GVHDatherapeutically effective amount of a compound
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`of the structure:
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`O
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`NH,
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`N~
`S77
`LL A
`
`N
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`\
`/N
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`NOnn
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`oy
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`or a pharmaceutically acceptable salt thereof.
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`22.
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`23.
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`24.
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`(New) The methodof claim 21, wherein the patient has classic chronic GVHD.
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`(New) The methodof claim 21, wherein the patient has overlap chronic GVHD.
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`(New) The method of claim 21, wherein the patient has steroid-dependent/refractory
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`chronic GVHD.
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`25.
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`(New) The method of claim 21, wherein the therapeutically effective amountofthe
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`compoundis about 40 mg/day, about 140 mg/day, about 280 mg/day, about 420 mg/day, about
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`560 mg/day, or about 840 mg/day.
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`Application No. 14/523,650
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`Docket No.: PIR-88501
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`REMARKS
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`Claims 1-20 were pending. Please enter the amendments and arguments submitted herewith.
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`By this Amendment, claims 1, 7-9, 11, and 16 have been amended, claims 2, 12-14, and 17 have
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`been canceled, and new claims 21-25 have been added. Support for the claim amendments and the
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`new claims can be found in the specification and claims as filed. For example, support for new
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`claims 22 and 23 may be found at least in paragraph [00216] of the specification as filed, and
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`support for new claim 24 may be foundat least in paragraph [00202] of the specification as filed.
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`Therefore, no new matter has been added.
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`Amendmentor cancellation of claims should in no way be construed as an acquiescence to a
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`rejection, or surrender of any subject matter. Amendments or cancellations have been made notonly
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`to claim with particularity the invention for which protection is sought, but also to expedite
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`prosecution of the present application. Applicant reserves the option to prosecute the originally filed
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`claims, or similar ones, in the instant or subsequently filed patent applications.
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`Response to Rejections Under 35 U.S.C. § 112, First Paragraph
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`Claims 1 and 3-18 stand rejected under 35 U.S.C. § 112, first paragraph, because the
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`specification allegedly does not reasonably provide enablement for a method of preventing the
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`occurrence of graft versus host disease (GVHD). 4/22/16 Office Action, page 6. Solely to expedite
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`prosecution, independent claim 1 has been amendedto recite: “A method of treating graft versus
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`host disease (GVHD) or reducing the severity of GVHD occurrence in a patient having chronic
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`GVHD.” Asa result of this amendment, reconsideration and withdrawal of the claim rejections
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`under 35 U.S.C. § 112, first paragraph, are respectfully requested.
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`Response to Rejections Under 35 U.S.C. § 102
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`Legal Standard
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`“A claim is anticipated only if each and every element as set forth in the claim is found,
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`either expressly or inherently described, in a single prior art reference.” Verdegaal Bros. v. Union
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`Oil Co. of California, 814 F.2d 628, 631, 2 USPQ2d 1051, 1053 (Fed. Cir. 1987).
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`“In relying upon the theory of inherency, the examiner must provide a basis in fact and/or
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`technical reasoning to reasonably support the determination that the allegedly inherent characteristic
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`necessarily flows from the teachings of the applied prior art.” Ex parte Levy, 17 USPQ2d 1461,
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`1464 (Bd. Pat. App. & Inter. 1990).
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`Regarding Izumi as evidenced by Magenau andMin
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`Claims 1-18, in particular, claims 1, 3-6, 11, 12, and 18, stand rejected under 35 U.S.C.
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`§§102(a)(1) and 102(a)(2) as allegedly being anticipated by Izumi
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`(US 2015/0086507), as
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`evidenced by Magenau (Srit. J. Haematology 2016, 173(2), 190-205) and Min (Kor. J. Hematology
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`2011, 46(2), 80-87). Applicant respectfully traverses.
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`Importantly,
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`in most circumstances, “only one reference should be used in making a
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`rejection under 35 U.S.C. 102.” MPEP § 2131.01. There are only three specific instances when a
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`multiple-reference novelty rejection is appropriate:
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`(A) to show that the primary reference contains
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`an enabled disclosure, (B) to explain the meaning of a term in the primary reference, or (C) to show
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`that a characteristic not disclosed in the primary reference is inherent. MPEP § 2131.01.
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`The Office has relied upon multiple references to support its rejection under 35 U.S.C.
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`§ 102. Specifically, the Office concedes that Izumi fails to teach methods of treating GVHD, but
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`introduces Magenau and Min as allegedly showing that “this condition is art recognized to be
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`directly associated with haematopoietic stem cell transplantation.” 4/22/16 Office Action, page 11.
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`However, the Office’s position does not fall within one of the three specific instances when a
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`multiple-reference rejection under 35 U.S.C. § 102 is appropriate. For example, Min discloses that
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`the incidence of chronic GVHD following hematopoietic stem cell transplantation ranges from 25%
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`to 80% (Min, page 80, left column). In other words, a patient receiving hematopoietic stem cell
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`transplantation does not necessarily have GVHD. So, the secondary references demonstrate that
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`Izumi fails to inherently teach or suggest the claimed invention ((C), above). See MPEP §2112 IV (a
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`pertinent excerpt 1s reproduced immediately below).
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`The fact that a certain result or characteristic may occuror be present in the prior art
`is not sufficient to establish the inherency of that result or characteristic. Jn re
`Rijckaert, 9 F.3d 1531, 1534, 28 USPQ2d 1955, 1957 (Fed. Cir. 1993) (reversed
`rejection because inherency was based on what would result due to optimization of
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`conditions, not what was necessarily present in the priorart); Jn re Oelrich, 666 F.2d
`578, 581-82, 212 USPQ 323, 326 (CCPA 1981). “To establish inherency,
`the
`extrinsic evidence ‘must makeclear that the missing descriptive matter is necessarily
`present in the thing described in the reference, and that it would be so recognized by
`persons of ordinary skill.
`Inherency, however, may not be established by
`probabilities or possibilities. The mere fact that a certain thing may result from a
`given set of circumstancesis not sufficient.’” Jn re Robertson, 169 F.3d 743, 745, 49
`USPQ2d 1949, 1950-51 (Fed. Cir. 1999) (citations omitted) (The claims were drawn
`to a disposable diaper having three fastening elements. The reference disclosed two
`fastening elements that could perform the same function as the three fastening
`elements in the claims. The court construed the claims to require three separate
`elements and held that the reference did not disclose a separate third fastening
`element, either expressly or inherently.).
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`Furthermore, for the same reason, the secondary references do not show that Izumi is enabled (A),
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`nor do the secondary references provide an adequate definition of a term in Izumi (B).
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`So, the Office has not met its burden of establishing that the claimed methods necessarily
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`flow from Izumi. Therefore, Applicant respectfully requests reconsideration and withdrawal of the
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`claim rejections under 35 U.S.C. § 102 based on the combination of Izumi, Magenau, and Min.
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`Response to Rejections Under 35 U.S.C. § 103
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`Legal Standard
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`To establish a prima facie case of obviousness, a number of criteria must be met. For
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`example,all of the limitations of a rejected claim must be taught or suggested by the combination of
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`references relied upon by the Examiner. Moreover, one of ordinary skill in the relevant art must
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`have a reasonable expectation of success in light of the cited references. Importantly, the reasonable
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`expectation of success must be found in the prior art, and may not be based on the Applicant’s
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`disclosure. Jn re Vaeck, 947 F.2d 488, 20 U.S.P.Q. 2d 1438 (Fed. Cir. 1991); see MPEP § 2143 - §
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`2143.03 for decisions pertinent to each ofthesecriteria.
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`Regarding Izumi as evidenced by Magenau andMin
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`Claims 1-18 stand rejected under 35 U.S.C. §103 as allegedly being obvious in view of
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`Izumi as evidenced by Magenau and Min. Applicant respectfully traverses.
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`Docket No.: PIR-88501
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`As an initial matter, it is worth noting that Magenau was published on March 27, 2016.
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`Therefore, based on its publication date, Magenau does not qualify as prior art under any section of
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`35 U.S.C. § 102. Importantly, in order for a reference to qualify as prior art under 35 U.S.C. § 103,
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`it mustfirst qualify under one or more sections of 35 U.S.C. § 102.
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`Applicant respectfully submits that the Examiner has not established a prima facie case of
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`obviousness with respect to amended claim 1 because the combination of references advanced by
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`the Examiner does not teach or suggest every element of the now-claimed invention, nor would one
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`of ordinary skill have had a reasonable expectation of success in developing the now-claimed
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`invention based on the cited combination of references.
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`Izumi relates to methods of mobilizing hematopoietic stem cells and progenitor cells to the
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`peripheral blood of a subject by administering a Btk inhibitor. Izumi, paragraph [0005]. It does not
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`teach or suggest treating GVHD.
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`Further, based on the disclosures of the cited references, one of ordinary skill in the art
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`would not have reasonably expected that compounds that mobilize hematopoietic stem cells and
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`progenitor cells to the peripheral blood of a subject would be effective treatments of GVHD.
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`Accordingly, reconsideration and withdrawal of the claim rejections under 35 U.S.C. § 103
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`based on Izumi, Magenau, and Min are respectfully requested.
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`Response to Rejections based on the Judicially Created Doctrine of
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`Obviousness-Type Double Patenting
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`Claims 1-6, 12, and 15-18 stand rejected on the grounds of nonstatutory obviousness-type
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`double patenting as allegedly being unpatentable over claims 1-5, 11, and 16-19 of U.S. Patent
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`Appl. No. 14/558,297 (Blazar).
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`Blazar was filed on December 2, 2014. The instant application was filed on October 24,
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`2014. So, because the instant application has an earlier filing date,
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`it
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`is the “earlier-filed”
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`application. Importantly:
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`If a “provisional” nonstatutory double patenting rejection is the only rejection
`remaining in an application having the earliest effective U.S. filing date (including
`any benefit claimed under 35 U.S.C. 120, 121, 365(c), or 386(c)) compared to the
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`Docket No.: PIR-88501
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`should withdraw the rejection in the
`the examiner
`reference application(s),
`application having the earliest effective U.S. filing date and permit that application to
`issue as a patent, thereby converting the “provisional” nonstatutory double patenting
`rejection in the other application(s) into a nonstatutory double patenting rejection
`when the application with the earliest U.S. effective filing date issues as a patent.
`MPEP804(1)(B)(1).
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`Therefore, because Applicant believes that the other pending rejections are overcome by this
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`Amendment, Applicant respectfully requests withdrawal of the rejections based on obviousness-
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`type double patenting in view of Blazar.
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`Conclusion
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`The Applicant believes that no fees are due in connection with the filing of this paper.
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`Nevertheless, the Director is hereby authorized to charge any and all required fees to our Deposit
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`AccountNo. 06-1448, reference PIR-885.01. If a telephone conversation with Applicant’s Attorney
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`would expedite prosecution of the application, the Examineris urged to contact the undersigned.
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`Dated: July 22, 2016
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`Respectfully submitted,
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`By: Janine S. Ladislaw/
`Janine S. Ladislaw, Ph.D.
`Registration No.: 64,000
`FOLEY HOAG LLP
`155 Seaport Blvd
`Boston, Massachusetts 02210
`(617) 832-1000
`Attorney For Applicant
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