throbber
Proc. Natl. Acad. Sci. USA
`Vol. 76, No. 11, pp. 5684-5688, November 1979
`Cell Biology
`
`Introduction and expression of a rabbit f3-globin gene in
`mouse fibroblasts
`(DNA-mediated gene transfer/cotransformation/intervening sequences/gene regulation)
`B. WOLD*, M. WIGLERt, E. LACYt, T. MANIATISt, S. SILVERSTEIN*, AND R. AXEL*
`*College of Physicians and Surgeons, Columbia University, New York, New York 10032; tCold Spring Harbor Laboratories, Cold Spring Harbor, New York
`11724; and tDivision of Biology, California Institute of Technology, Pasadena, California 91125
`Communicated by Sol Spiegelman, July 16, 1979
`
`The cloned chromosomal rabbit fl-globin gene
`ABSTRACT
`has been introduced into mouse fibroblasts by DNA-mediated
`gene transfer (transformation). In this report, we examine the
`expression of the rabbit gene in six independent transformants
`that contain from 1 to 20 copies of the cloned globin gene.
`Rabbit globin transcripts were detected in two of these trans-
`formants at steady-state concentrations of 5 and 2 copies per cell.
`The globin transcripts from one cell line are polyadenylylated
`and migrate as 9S RNA on methylmercury gels. These transcripts
`reflect correct processing of the two intervening sequences but
`lack 48 + 5 nucleotides present at the 5' terminus of rabbit
`erythrocyte globin mRNA.
`Cellular genes coding for selectable biochemical functions can
`be stably introduced into cultured mammalian cells by DNA-
`mediated gene transfer (transformation) (1, 2). Biochemical
`transformants are readily identified by the stable expression
`of a gene coding for a selectable marker. These transformants
`represent a subpopulation of competent cells that integrate
`other physically unlinked genes for which no selective criteria
`exist (3). In this manner, we have used a viral thymidine kinase
`(tk) gene as a selectable marker to isolate mouse cell lines that
`are stably transformed with the tk gene along with bacterio-
`phage OX174, plasmid pBR322, or the cloned chromosomal
`rabbit f3-globin gene sequences (3).
`Cotransformed mouse fibroblasts containing the rabbit
`,B-globin gene provide an opportunity to study the expression
`and subsequent processing of these sequences in a heterologous
`host. In this report, we demonstrate the expression of the
`transformed rabbit 3-globin gene generating a discrete poly-
`adenylylated 9S species of globin RNA. This RNA results from
`correct processing of both intervening sequences, but lacks
`approximately 48 nucleotides present at the 5' terminus of
`mature rabbit 3-globin mRNA.
`
`MATERIALS AND METHODS
`Cell Culture. Murine Ltk- aprt- cells are adenine phos-
`phoribosyltransferase-negative derivatives of Ltk- clone 1D
`cells (4) that were originally isolated and characterized by R.
`Hughes and P. Plagemann. Cells were maintained in growth
`medium and prepared for transformation as described (5).
`Transformation and Selection. The transformation protocol,
`selection for tk+ transformants, and maintenance of transfor-
`mant cell lines were as described (5).
`DNA Isolation. DNA was extracted from cultured L cells
`as described (5). Recombinant phage containing the rabbit
`fl-globin gene in the X phage vector Charon 4A were grown and
`
`The publication costs of this article were defrayed in part by page
`charge payment. This article must therefore be hereby marked "ad-
`vertisement" in accordance with 18 U. S. C. §1734 solely to indicate
`this fact.
`
`purified, and DNA was isolated as described (6). The herpes
`virus DNA fragment containing the tk gene was purified from
`total DNA of herpes simplex virus strain F (7). Intact herpes
`virus DNA was digested with the restriction endonuclease Kpn
`I and fractionated by agarose gel electrophoresis, and the
`5.1-kilobase pair (kbp) fragment containing the tk gene was
`extracted from the gel as described (8).
`RNA Isolation. Total RNA was isolated from logarithmic-
`phase cultures of transformed L cells by successive extractions
`with phenol at pH 5.1, phenol/chloroform/isoamyl alcohol
`(25:24:1, vol/vol), and chloroform/isoamyl alcohol (24:1,
`vol/vol). After ethanol precipitation, the RNA was digested
`with DNase (9) and precipitated with ethanol. Nuclear and
`cytoplasmic fractions were isolated as described (5) and
`RNAs were extracted as described above. Cytoplasmic poly-
`adenylylated RNA was isolated by oligo(dT)-cellulose chro-
`matography (10).
`cDNA Synthesis. Rabbit and mouse cDNAs were prepared
`by using avian myeloblastosis virus reverse transcriptase
`(RNA-dependent DNA polymerase) (obtained from J. W.
`Beard), as described (11).
`DNA Filter Hybridizations. Cellular DNA was digested
`with restriction endonucleases, electrophoresed on agarose slab
`gels, transferred to nitrocellulose filter sheets, and hybridized
`with 32P-labeled DNA probes as described by Wigler et al.
`(5).
`Solution Hybridizations. 32P-Labeled globin cDNAs (spe-
`cific activities of 2-9 X 108 cpm/,gg) were hybridized with
`excess RNA in 0.4 M NaCl/25 mM 1,4-piperazinediethane-
`sulfonic acid (Pipes), pH 6.5/5 mM EDTA at 750C. Incubation
`times did not exceed 70 hr. Rots were calculated as moles of
`RNA nucleotides per liter times time in seconds. The fraction
`of cDNA rendered resistant to the single-strand nuclease S1 in
`hybridization was determined as described (10).
`RNA Filter Hybridizations. RNA was electrophoresed
`through 1% agarose slab gels (17 X 20 X 0.4 cm) containing 5
`mM methylmercury hydroxide as described by Bailey and
`Davidson (12). The concentration of RNA in each slot was 0.5
`ug/,ld. Electrophoresis was at 110 V for 12 hr at room tem-
`perature.
`RNA was transferred from the gel to diazotized cellulose
`paper as described by Alwine et al. (13) by using pH 4.0 citrate
`transfer buffer. After transfer, the RNA filter was incubated
`for 1 hr with transfer buffer containing carrier RNA at 500
`,ug/ml. The RNA on the filters was hybridized with cloned
`DNA probe at 50 ng/ml labeled by 32P nick translation (14) to
`specific activities of 2-8 X 108 cpm/,g. Reaction volumes were
`
`Abbreviations: tk, thymidine kinase; kbp, kilobase pairs; Pipes, 1,4-
`piperazinediethanesulfonic acid; Rot, product of RNA concentration
`(moles of nucleotide per liter) and incubation time (seconds).
`
`5684
`
`Merck Ex. 1034, pg 1109
`
`

`
`Proc. Natl. Acad. Sci. USA 76 (1979)
`
`5685
`
`Charon 4A (Fig. IA) (unpublished data). The purified tk gene
`was mixed with a 100-fold molar excess of intact recombinant
`DNA from clone R3G1. This DNA was then exposed to mouse
`Ltk- cells under transformation conditions previously described
`(5). After 2 weeks in selective medium, tk+ transformants were
`observed at a frequency of one colony per 106 cells per 20 pg
`of tk gene. Clones were picked and grown into mass culture.
`We then asked if the tk+ transformants also contain rabbit
`/3-globin sequences. High molecular weight DNA from eight
`transformants was cleaved with the restriction endonuclease
`Kpn I. The DNA was fractionated by agarose gel electropho-
`resis and transferred to nitrocellulose filters, and these filters
`were then annealed with nick-translated globin [32P]DNA [blot
`hybridization (17)]. Cleavage of this recombinant phage with
`the enzyme Kpn I generates a 4.7-kbp fragment that contains
`the entire adult 3-globin gene, along with 1.4 kbp of 5' flanking
`information and 2.0 kbp of 3' flanking information (Fig. 1A).
`This fragment was purified by. gel electrophoresis and nick
`translated to generate a hybridization probe. Blot hybridization
`experiments showed that the 4.7-kbp Kpn I fragment con-
`taining the globin gene was present in the DNA of six of the
`eight tk+ transformants. In three of the clones (Fig. 2, lanes E,
`F, and H), additional rabbit globin bands were observed, which
`probably resulted from the loss of at least one of the Kpn I sites
`during transformation. The number of rabbit globin genes in-
`tegrated in these transformants was variable: some clones
`contained a single copy of the gene (Fig. 2, lanes J and K),
`whereas others contained up to 20 copies of the heterologous
`gene. It should be noted that the fl-globin genes of mouse and
`rabbit are partially homologous. However, we do not observe
`hybridization of the rabbit f3-globin probe to Kpn-cleaved
`mouse DNA, presumably because Kpn cleavage of mouse DNA
`leaves the fl-gene cluster in exceedingly high molecular weight
`fragments not readily detected in these experiments (Fig. 2).
`These results demonstrate the introduction of the cloned
`chromosomal rabbit f-globin gene into mouse cells by DNA-
`mediated gene transfer.
`
`Cell Biology: Wold et al.
`25 Ml/cm2 of filter. Hybridization was in 4X standard saline
`citrate (0.15 M NaCI/0.015 M sodium citrate)/50% formamide
`at 570C for 36-48 hr.
`After hybridization, filters were soaked in two changes of 2X
`standard saline citrate/25 mM sodium phosphate/1.5 mM so-
`dium pyrophosphate/0.1% sodium dodecyl sulfate/5 mM
`EDTA at 370C for 30 min with shaking to remove formamide.
`Successive washes were at 680C with 1X and O. X standard
`saline citrate containing 5 mM EDTA and 0.1% sodium dodecyl
`sulfate for 30 min each.
`Berk-Sharp Analysis of Rabbit #-Globin RNA in Trans-
`formed Mouse L Cells. The hybridizations were carried out
`in 80% (vol/vol) formamide (Eastman)/0.4 M Pipes, pH 6.5/0.1
`mM EDTA/0.4 M NaCI (15, 16) for 18 hr at 51°C for the 1.8
`kbp Hha I fragment and 49°C for the Pst I fragment. The
`hybrids were treated with S1 nuclease and analyzed by a
`modification of the procedure described by Berk and Sharp
`(16).
`
`RESULTS
`Transformation of mouse cells with the rabbit
`f,-globin gene
`We have performed cotransformation experiments with the
`chromosomal adult rabbit fl-globin gene, using the purified
`herpes virus tk gene as a biochemical marker. The addition of
`the tk gene to mutant Ltk- mouse fibroblasts results in the ap-
`pearance of stable transformants that can be selected by their
`ability
`to grow in hypoxanthine/aminopterin/thymidine
`(HAT) medium. Cells were cotransformed with a #-globin gene
`clone designated RJG1, which consists of a 15.5-kbp insert of
`rabbit DNA carried in the bacteriophage X cloning vector
`
`TI
`
`5 1
`
`30
`
`A
`
`K ilnhiici
`rmiiooases.-
`

`I.
`
`I
`
`I
`
`A
`
`B
`
`C
`
`D
`
`E
`
`F
`
`G
`
`H
`
`J
`
`K
`
`L
`
`1 46 222
`
`221
`
`t10
`
`'. ..M
`
`438
`
`95'
`
`2
`
`3
`
`~V-
`
`B p
`
`BG1
`
`Rabbit
`globin mRNA
`
`Transformant
`globin RNA
`(A) Structure of the rabbit 3-globin genomic clone Rf3G1.
`FIG. 1.
`The solid box represents the mRNA coding sequence in the adult
`13-globin gene. The clear regions bounded by coding sequence indicate
`the intervening sequences within the f3-globin gene. The larger 3'
`intervening sequence is about 600 base pairs long and the smaller 5'
`sequence (shown only in the lower map) is about 125 base pairs long.
`Restriction sites are indicated by arrows: v, Kpn I; 0, Pst I. (B)
`Structure of the cDNA clone pBG1 and rabbit f3-globin mRNA. The
`Hha I restriction fragment of p3G1 is shown. The heavy black lines
`indicate pMB9 plasmid vector sequence and the thin straight line
`indicates rabbit mRNA sequence: * Hha I sites. The map of rabbit
`globin mRNA shows the 438-nucleotide translated region bounded
`by the 5' 56-nucleotide untranslated region and the 3' 95-nucleotide
`untranslated region. The bottom map is of cytoplasmic polyadenyl-
`ylated rabbit globin RNA from transformant cell line 6, which lacks
`approximately 48 nucleotides of 5' mRNA sequence (see Results).
`
`Rabbit ,B-globin genes in transformed mouse L cells. High
`FIG. 2.
`molecular weight DNA from eight independent cotransformant clones
`was digested with Kpn I and electrophoresed on a 0.7% agarose gel.
`The DNA was denatured in situ and transferred to nitrocellulose
`filters, which were then annealed with a 32P-labeled 4.7-kbp fragment
`containing the rabbit f3-globin gene. Lanes A and L, 50 pg of the
`4.7-kbp Kpn fragment of RfG1; lane B, 15 ,ug of rabbit liver DNA
`digested with Kpn; lane C, 15 ,ug of Ltk- aprt- DNA; lanes D-K, 15
`,ug of DNA from each of eight independently isolated tk+ transfor-
`mants.
`
`Merck Ex. 1034, pg 1110
`
`

`
`5686
`
`Cell Biology: Wold et al.
`Rabbit ,3-globin sequences are transcribed in mouse
`transformants
`The cotransformation system we have developed may provide
`a functional assay for cloned eukaryotic genes if these genes are
`expressed in the heterologous recipient cell. Six transformed
`cell clones were therefore analyzed for the presence of rabbit
`3-globin RNA sequences. In initial experiments we performed
`solution hybridization reactions to determine the cellular
`concentration of rabbit globin transcripts in our transformants.
`A radioactive cDNA copy of purified rabbit a- and 3-globin
`mRNA was annealed with a vast excess of cellular RNA. Be-
`cause homology exists between the mouse and rabbit globin
`sequences, it was necessary to determine experimental condi-
`tions such that the rabbit globin cDNAs did not form stable
`hybrids with mouse globin mRNA but did react completely
`with homologous rabbit sequences. At 750C in the presence of
`0.4 M NaCl, over 80% hybridization was observed with the
`rabbit globin mRNA, whereas the heterologous reaction with
`purified mouse globin mRNA did not exceed 10% hybridiza-
`tion. The RotI/2 of the homologous hybridization reaction was
`6 X 10-4, a value consistent with a complexity of 1250 nucle-
`otides contributed by the a- plus f-globin sequences in our
`cDNA probe (10).
`This rabbit globin cDNA was used as a probe in hybridization
`reactions with total RNA isolated from six transformed cell lines
`(Fig. 3 and data not shown). Total RNA from transformed clone
`6 (Fig. 2, lane H) protected 44% of the rabbit cDNA at com-
`pletion, the value expected if only f-gene transcripts were
`present. This reaction displayed pseudo-first-order kinetics with
`an Rot12 of 2 X 103. A second transformant (Fig. 2, lane E)
`reacted with an Rot112 of 8 X 103 (data not shown). No signifi-
`cant hybridization was observed at Rots > 104 with total RNA
`preparations from the four additional transformants.
`We have characterized the RNA from clone 6 in greatest
`detail. RNA from this transformant was fractionated into nu-
`clear and cytoplasmic populations to determine the intracellular
`localization of the rabbit globin RNA. The cytoplasmic RNA
`
`V0
`.N 20
`
`40
`<60
`
`V
`
`0
`
`0
`
`a 800.1
`'2 100-6
`
`-5 -4 -3
`
`-2
`
`1
`
`2
`
`3
`
`4
`
`5
`
`-1
`o
`log Rot
`Hybridization of rabbit globin cDNA with RNA from a
`FIG. 3.
`mouse L cell transformant containing R3G1 sequences. The curves
`represent single pseudo-first-order kinetic components fit to the data
`l)y least-squares methods. 0, Hybridization of rabbit globin
`I:'2P]cDNA (7-9 X 108 cpm/mg) with excess globin template RNA. At
`termination, 80% of the cDNA is in hybrid. The rate constant is 1.1
`X 10() M- I sec-1. v, Hybridization of rabbit globin cDNA with mouse
`globin mRNA. &, Hybridization of excess polyadenylylated cyto-
`plasmic RNA from transformant 6 (see text) with rabbit globin cDNA.
`The rate constant is 2.8 X 10-2 M-1 sec-1. The extent of reaction was
`43% after normalization for the 70% reactivity of the cDNA at the time
`of this measurement. 0, Hybridization of excess total cellular RNA
`from transformant 6 with rabbit globin cDNA. At termination, 43%
`of the [:32P]cDNA was in hybrid. The rate constant is 13.5 X 10-4 M-1
`sec-1. o, Hybridization of excess nuclear RNA from transformant
`6 with rabbit globin cDNA. The SI resistance of cDNA at zero time
`has been subtracted from all hybridization values. These background
`values were 5% and 14% for the cDNA preparations used in this ex-
`periment.
`
`Proc. Natl. Acad. Sci. USA 76 (1979)
`
`was further fractionated by oligo(dT)-cellulose chromatography
`into poly(A)+ and poly(A)- RNA. Poly(A)+ cytoplasmic RNA
`from clone 6 hybridizes with the rabbit cDNA with an Rotl/2
`of 25. This value is 1/80th the Rotl/2 observed with total cellular
`RNA, consistent with the observation that poly(A)+ cytoplasmic
`RNA is 1-2% of the total RNA in a mouse cell. Hybridization
`is not detectable with either nuclear RNA or cytoplasmic
`poly(A)- RNA at Rot values of 1 X 104 and 2 X 104, respec-
`tively. The steady-state concentration of rabbit 3-globin RNA
`present in our transformant can be calculated from the Rotl/2
`to be about five copies per cell, with greater than 90% localized
`in the cytoplasm.
`Several independent experiments argue that the globin RNA
`detected derives from transcription of the rabbit DNA se-
`quences present in this transformant: (i) cDNA was prepared
`from purified 9S mouse globin RNA. This cDNA does not hy-
`bridize with poly(A)+ RNA from clone 6 at Rot values at which
`the reaction with rabbit globin cDNA is complete (Fig. 3). (ii)
`Rabbit globin cDNA does not hybridize with total cellular RNA
`obtained with tk+ globin- transformants at Rot values exceeding
`104. (iii) The hybridization we observe does not result from
`duplex formation with rabbit globin DNA possibly contami-
`nating the RNA preparations. Rabbit cDNA was annealed with
`total cellular RNA from clone 6, the reaction product was
`treated with S1 nuclease, and the duplex was subjected to
`equilibrium denfsity centrifugation in cesium sulfate under
`conditions that separate DNA-RNA hybrids from duplex DNA.
`The S1-resistant cDNA banded at a density of 1.54 g/ml, as
`expected for DNA-RNA hybrid structures (data not shown).
`These data, along with the observation that globin RNA is
`polyadenylylated, demonstrate that the hybridization we ob-
`serve with RNA preparations does not result from contami-
`nating DNA sequences.
`Characterization of rabbit globin transcripts in
`transformed cells
`In rabbit erythroblast nuclei, the fl-globin gene sequences are
`detected as a 14S precursor RNA that reflects transcription of
`two intervening sequences that are subsequently removed from
`this molecule to generate a 9S messenger RNA (unpublished
`results). It was therefore of interest to determine whether the
`globin transcripts we detected exist as a discrete 9S species,
`which is likely to reflect appropriate splicing of the rabbit gene
`transcript by the mouse fibroblast. Cytoplasmic poly(A)-con-
`taining RNA from clone 6 was electrophoresed on a methyl-
`mercury/agarose gel (12) and transferred to diazotized cellulose
`paper (13, 18). After transfer, the RNA on the filters was hy-
`bridized with DNA from the plasmid p#G1, which contains
`rabbit 3-globin cDNA sequences (19). Using this 32P-labeled
`probe, we observed a discrete 9S species of RNA in the cyto-
`plasm of the transformant, which comigrated with rabbit globin
`mRNA isolated from rabbit erythroblasts (Fig. 4). Hybridization
`to 9S RNA species was not observed in parallel lanes containing
`either purified mouse 9S globin RNA or poly(A)-containing
`cytoplasmic RNA from a tk+ transformant containing no rabbit
`globin genes.
`We were unable in these experiments to detect the presence
`of a 14S precursor in nuclear RNA populations from the
`transformants. This is not surprising, because the levels expected
`in nuclear RNA, given the observed cytoplasmic concentration,
`are likely to be below the limits of detection for this technique.
`The 5' and 3' boundaries of the rabbit globin sequences ex-
`pressed in transformed fibroblasts along with the internal
`processing sites carq be defined more accurately by hybridizing
`this RNA with cloned DNAs, followed by SI nuclease digestion
`and subsequent gel analysis of the DNA products (16). When
`
`Merck Ex. 1034, pg 1111
`
`

`
`Cell Biology: Wold et al.
`
`A B C
`
`D
`
`E
`
`28S-
`
`18S-
`
`9s-
`
`4S-
`
`Sizing of cytoplasmic polyadenylylated rabbit globin
`FIG. 4.
`transcripts from transformant 6. RNA was electrophoresed in a 1%
`methylmercury/agarose gel and the RNA was transferred to diazo-
`tized cellulose paper. The positions of 28S, 18S, and 4S RNAs on the
`gel were determined optically after staining with ethidium bromide.
`The RNA on the filter was hybridized with 32P-labeled plasmid DNA
`(pfGl) containing the rabbit f-globin cDNA sequence. Lane A, 1 ng
`of purified 9S polyadenylylated RNA from rabbit reticulocytes, plus
`25 mg of carrier chicken oviduct RNA. Lane B, 50 pg of purified 9S
`polyadenylylated RNA from rabbit reticulocytes, plus 25kg of carrier
`chicken oviduct RNA. Lane C, 1 ng of purified 9S polyadenylylated
`RNA from mouse reticulocytes plus 25 Mg of carrier RNA. Lane D,
`:30 Mg of polyadenylylated cytoplasmic RNA from transformant 6.
`Lane E, 30 Mg of cytoplasmic polyadenylylated RNA from a trans-
`tormant containing no rabbit globin genes.
`
`/-globin mRNA from rabbit erythroid cells was hybridized
`with cDNA clone pfGl (Fig. 1B) under appropriate conditions,
`the entire 576-base pair insert of cDNA was protected from Si
`nuclease attack. When this cDNA clone was hybridized with
`RNA from our transformant, surprisingly, a discrete DNA band
`was observed at 525 base pairs, but not at 576 base pairs (Fig.
`5). These results suggest that, in this transformant, rabbit globin
`RNA molecules are present that have a deletion in a portion of
`the globin mRNA sequence at the 5' or 3' termini. To distin-
`guish between these possibilities, DNA of the X clone, R3G1,
`containing the chromosomal rabbit /3-globin sequence hy-
`bridized with transformed fibroblast RNA. The hybrid formed
`was treated with S1 nuclease, and the protected DNA fragments
`were analyzed by alkaline agarose gel electrophoresis and
`identified by Southern blotting procedures (17). Because the
`rabbit /-globin gene is interrupted by two intervening se-
`quences, the hybridization of mature rabbit mRNA to RfG1
`DNA generates three DNA fragments in this sort of analysis:
`a 146-base pair fragment spanning the 5' terminus to the
`junction of the small intervening sequence, a 222-base pair
`internal fragment bridging the small and large intervening
`sequences, and a 221-base pair fragment spanning the 3'
`junction of the large intervening sequence to the 3' terminus
`of the mRNA molecule (Fig. 1A). When transformant RNA was
`analyzed in this fashion, we observed a 222-base pair fragment
`and an aberrant fragment of 100 base pairs but no 146-base pair
`fragment (Fig. 5); Hybridization with a specific 5' probe
`showed that the internal 222 base pair fragment was present
`(data not shown). The sum of the protected lengths equaled the
`length of the DNA fragment protected by using the cDNA
`clone. Taken together, these results indicate that although the
`intervening sequences expressed in transformed mouse fibro-
`blast are removed from the RNA transcripts precisely, they5'
`termini of the cytoplasmic transcripts we' observe do not contain
`
`Proc. Natl. Acad. Sci. USA 76 (1979)
`
`5687
`
`A
`
`1
`
`2
`
`3
`
`B
`
`1800-
`
`576- ow
`
`EA
`
`^ -525---
`
`221 222-
`146-
`100-
`
`Characterization of rabbit f3-globin RNA in transformed
`FIG. 5.
`mouse L cells. Numbers of base pairs are given beside the autora-
`diograms. (A) Both total rabbit reticulocyte RNA and poly(A)+ RNA
`purified from cell line 6 were hybridized to the 1.8-kbp Hha I fragment
`from plasmid pf3G1 (Fig. 1B) and analyzed as described by Berk and
`Sharp (16). Lane 1, 0.2 gg of total reticulyocyte RNA was hybridized
`to 20 ng of the 1.8-kbp Hha globin fragment in 5 Al. Lane 2, 18 ng of
`the 1.8-kbp Hha fragment was hybridized in 2.5 Ail in the absence of
`any added RNA. Lane 3, 30 Asg of poly(A)+ RNA purified from cell
`line 6 was hybridized to 75 ng of the 1.8-kbp Hha fragment in 10 ,ul.
`The 1800-base pair band is the renatured Hha fragment. (B) Both
`total rabbit reticulocyte RNA and poly(A)+ RNA purified from cell
`line 6 were hybridized to a 5.60-kbp Pst I fragment containing the
`genomic copy of the rabbit f3-globin gene. The Berk-Sharp analysis
`was carried out by a procedure to be described elsewhere. Only the
`bottom half of the autoradiogram is shown and therefore lane-specific
`background present in lanes 1 and 3, as well as in the RNA- control
`(lane 2) is not shown. We believe that this background results from
`the formation of DNA-DNA duplexes between a small number of
`nicked Pst fragments prior to S1 treatment. Lane 1, 0.35 gg of total
`rabbit reticulocyte RNA was hybridized to 0.1 gg of the 5.60-kbp Pst
`fragment in 10 Al. Lane 2,0.12 ,ug of the Pst fragment was hybridized
`in 10 Ml in the absence of any RNA. Lane 3, 30 Mg of poly(A)+ RNA
`purified from cell line 6 was hybridized to 0.12 Mg of the 5.60-kbp Pst
`fragment in 10AMl.
`
`about 48 i 5 nucleotides present in mature 9S RNA of rabbit
`erythroblasts.
`
`DISCUSSION
`In these studies, we have constructed mouse cell lines that
`contain the rabbit f3-globin gene and have analyzed the ability
`of the mouse fibroblast recipient to transcribe and process this
`heterologous gene. Solution hybridization experiments in
`concert with RNA blotting techniques indicate that, in at least
`one transformed cell line, rabbit globin sequences are expressed
`in the cytoplasm as a polyadenylylated 9S species. Correct
`processing of the rabbit 13-globin gene has also been observed
`in tk+ mouse cell transformants in which the globin and tk
`plasmids have been ligated prior to transformation (20). Similar
`results have been obtained by using a viral vector to introduce
`the rabbit globin gene into monkey cells (21, 22). Taken to-
`gether, these results suggest that nonerythroid cells from het-
`erologous species contain the enzymes necessary to correctly
`process the intervening sequences of a rabbit gene whose ex-
`pression usually is restricted to erythroid cells.
`The level of expression of rabbit globin sequences in our
`transformant is low: five copies of globin RNA are present in
`the cytoplasm of each cell. Our results indicate that the two
`intervening sequences present in the original globin transcript
`are processed and removed at loci indistinguishable from those
`observed in rabbit erythroid cells. Surprisingly, 45 nucleotides
`present at the 5' terminus of mature rabbit mRNA are absent
`
`Merck Ex. 1034, pg 1112
`
`

`
`5688
`
`Cell Biology: Wold et al.
`from the /3-globin RNA sequence detected in the cytoplasm of
`the transformant we have examined. It is possible that incorrect
`initiation of transcription occurs about the globin gene in this
`mouse cell line. Alternatively, the globin sequences we detect
`may result from transcription of a long precursor that ultimately
`must undergo 5' processing to generate the mature 9S species.
`Incorrect processing at the 5' terminus in the mouse fibroblast
`could be responsible for our results. At present, it is difficult to
`distinguish among these alternatives. Because we are restricted
`in our analysis to a single transformant, we do not know whether
`these observations are common to all transformants expressing
`the globin gene or reflect a rare but interesting abberation. It
`should be noted, however, that in similar experiments by
`Weissmann and his colleagues (20) at least a portion of the
`rabbit globin RNA molecules transcribed in transformed mouse
`fibroblasts retain the correct 5' terminus.
`Several alternative explanations can be offered for the ex-
`pression of globin sequences in transformed fibroblasts. It is
`possible that constitutive synthesis of globin RNA occurs in
`cultured fibroblasts (23) at levels five to six orders of magnitude
`below the level observed in erythroblasts. The introduction of
`20 additional globin DNA templates may simply increase this
`constitutive transcription to the: levels observed in our trans-
`formant. Alternatively, it is possible that the homologous globin
`gene is repressed by factors that are partially overcome by a
`gene dosage effect provided by the introduction of 20 additional
`globin genes. Finally, normal repression of the globin gene in
`a fibroblast may depend upon the position of these sequences
`in the chromosome. At least some of the newly introduced genes
`are likely to reside at loci distant from the resident mouse globin
`genes. Some of these ectopic sites may support low level tran-
`scription. Our data do not permit us to distinguish among these
`and other alternatives.
`Although the number of rabbit globin genes within a given
`transformant remains stable for over a hundred generations of
`culture in hypoxanthine/aminopterin/thymidine (unpublished
`studies), it has not been possible to prove that these sequences
`are covalently integrated into recipient cell DNA. In previous
`studies, however, we have demonstrated that cotransformation
`of either OX174 or plasmid pBR322 results in the stable inte-
`gration of these sequences into high molecular nuclear DNA.
`In the present study, the globin gene represents a small internal
`segment of the high molecular weight concatenated phage
`DNA used in the transformation (Fig. 1A). Analysis of inte-
`gration sites covalently linked to donor DNA is therefore dif-
`ficult. Preliminary studies using radioactive X sequences as a
`probe in DNA, blotting experiments indicate that, in some of
`our cell lines, we have introduced a contiguous stretch of re-
`combinant phage DNA, with a minimum length of 50 kbp.
`The presence of 9S globin RNA in the cytoplasm of trans-
`formants suggests that this RNA may be translated to give rabbit
`3-globin polypeptide. Attempts to detect this protein in cell
`lysates using a purified anti-rabbit f3-globin antibody (kindly
`provided by S. Boyer) have thus far been unsuccessful. It is
`possible that the globin RNAs in our transformant are not
`translated or are translated with very low efficiency due to the
`absence of a functional ribosomal binding site. The cytoplasmic
`globin transcripts in our transformant lack about 48 nucleotides
`of untranslated 5' sequence (Fig. 1B), which includes 13 nu-
`
`Proc. Natl. Acad. Sci. USA 76 (1979)
`
`2.
`3.
`
`4.
`
`5.
`
`6.
`
`7.
`
`8.
`
`9.
`
`cleotides known to interact with the 40S ribosomal subunit in
`nuclease protection studies (24, 25). Even if translation did
`occur with normal efficiency, it is probable that the protein
`would exist at' levels below the limits of detection of our im-
`munologic assay due to the low level of globin RNA, and the
`observation that the half-life of (3 globin in the absence of heme
`and a globin may be less than 30 min (22).
`These studies indicate the potential value of cotransformation
`systems in the analysis of eukaryotic gene expression. The in-
`troduction of wild-type genes along with native and in vitro-
`constructed mutant genes into cultured cells provides an assay
`for the functional significance of sequence organization. It is
`obvious from these studies that this analysis will be facilitated
`by the ability to extend the generality of cotransformation to
`recipient cell lines, such as murine erythroleukemia cells, that
`provide a more appropriate environment for the study of het-
`erologous globin gene expression. -
`Wigler, M., Silverstein, S., Lee, L. S., Pellicer, A., Cheng, Y. C.
`1.
`& Axel, R. (1977) Cell 11, 223-232.
`Maitland, N. J. & McDougall, J. K. (1977) Cell 11, 233-241.
`Wigler, M., Sweet, R., Sim, G. K., Wold, B., Pellicer, A., Lacy,
`E., Maniatis, T., Silverstein, S. & Axel, R. (1979) Cell 16, 777-
`785.
`Kit, S., Dubbs, D., Piekarski, L. & Hsu, T. (1963) Exp. Cell Res.
`31,291-312.
`Wigler, M., Pellicer, A., Silverstein, S., Axel, R., Urlaub, G. &
`Chasin, L. (1979) Proc. Natl. Acad. Sci. USA 76, 1373-1376.
`Maniatis, T., Hardison, R. C., Lacy, E., Lauer, J., O'Connell, C.,
`Quon, D., Sim, G. K. & Efstratiadis, A. (1978) Cell 15, 687-
`701.
`Pellicer, A., Wigler, M., Axel, R. & Silverstein, S. (1978) Cell 14,
`133-141.
`Wigler, M., Pellicer, A., Silverstein, S. & Axel, R. (1978) Cell 14,
`725-731.
`Maxwell, I. H., Maxwell, F. & Hahn, W. E. (1977) Nucleic Acids
`Res. 4, 241-246.
`Axel, R., Feigelson, P. & Schutz, G. (1976) Cell 7,247-254.
`Myers, J. C. & Spiegelman, S. (1978) Proc. Natl. Acad. Sci. USA
`75,5329-5333.
`Bailey, J. & Davidson, N. (1976) Anal. Biochem. 70,75-85.
`Alwine, J., Kemp, D., Parker, B., Reiser, J., Renart, I.. Stark. G.
`& Wahl, G. (1979) Methods Enzymol. 68, in press.
`Weinstock, R., Sweet, R., Weiss, M., Cedar, H. & Axel, R. (1978)
`Proc. Natl. Acad. Sci. USA 75, 1299-1303.
`Casey, J. & Davidson, N. (1977) Nucleic Acids Res. 4, 1539-
`1552.
`Berk, A. J. & Sharp, P. A. (1977) Cell 12,721-732.
`Southern, E. M. (1975) J. Mol. Biol. 98,503-517.
`Alwine, J. C., Kemp, D. J. & Stark, G. R. (1977) Proc. Natl. Acad.
`Sci. USA 74,5350-5354.
`Maniatis, T., Sim, G. K., Efstratiadis, A. & Kafatos, F. C. (1976)
`Cell 8, 163-182.
`Mantei, N., Boll, W. & Weissmann, C. (1979) Nature (London)
`281,40-46.
`Hamer, D. H. & Leder, P. (1979) Nature (London), 281, 35-
`39.
`Mulligan, R. C., Howard, B. H. & Berg, P. (1979) Nature (Lon-
`don) 277, 108-114. .
`Humphries, S., Windass, J. & Williamson, R. (1976) Cell 7,
`267-277.
`Efstratiadis, A., Kafatos, F. & Maniatis, T. (1977) Cell 10,
`571-585.
`Legon, S. (1976) J. Mol. Biol. 106,37-53.
`
`16.
`17.
`18.
`
`10.
`11.
`
`12.
`13.
`
`14.
`
`15.
`
`19.
`
`20.
`
`21.
`
`22.
`
`23.
`
`24.
`
`25.
`
`Merck Ex. 1034, pg 1113

This document is available on Docket Alarm but you must sign up to view it.


Or .

Accessing this document will incur an additional charge of $.

After purchase, you can access this document again without charge.

Accept $ Charge
throbber

Still Working On It

This document is taking longer than usual to download. This can happen if we need to contact the court directly to obtain the document and their servers are running slowly.

Give it another minute or two to complete, and then try the refresh button.

throbber

A few More Minutes ... Still Working

It can take up to 5 minutes for us to download a document if the court servers are running slowly.

Thank you for your continued patience.

This document could not be displayed.

We could not find this document within its docket. Please go back to the docket page and check the link. If that does not work, go back to the docket and refresh it to pull the newest information.

Your account does not support viewing this document.

You need a Paid Account to view this document. Click here to change your account type.

Your account does not support viewing this document.

Set your membership status to view this document.

With a Docket Alarm membership, you'll get a whole lot more, including:

  • Up-to-date information for this case.
  • Email alerts whenever there is an update.
  • Full text search for other cases.
  • Get email alerts whenever a new case matches your search.

Become a Member

One Moment Please

The filing “” is large (MB) and is being downloaded.

Please refresh this page in a few minutes to see if the filing has been downloaded. The filing will also be emailed to you when the download completes.

Your document is on its way!

If you do not receive the document in five minutes, contact support at support@docketalarm.com.

Sealed Document

We are unable to display this document, it may be under a court ordered seal.

If you have proper credentials to access the file, you may proceed directly to the court's system using your government issued username and password.


Access Government Site

We are redirecting you
to a mobile optimized page.





Document Unreadable or Corrupt

Refresh this Document
Go to the Docket

We are unable to display this document.

Refresh this Document
Go to the Docket