throbber
(12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION. TREATY (PCT)
`
`(19) World Intellectual Property Organiution
`international Bureau
`
`I 1111 DlllE ~ fillll 10011111111 fill I II Ill lllnllll lllll l~Hffll fill 11111~ ~111111 Ill
`
`(43) International Publication Date
`19 October 2006 (19.10.2006) .
`
`(51) International Patent ClasslflcaUon:
`. A61K 3114709 (2006.01)
`A61P 15/06 (2006.01)
`A61K 3114715 (2006.01)
`A61P ZSIZB (2006.01)
`A61P 11106 (2006.01)
`
`PCT
`
`(10) International Publication Number
`WO 2006/108666 Al .
`(81) Designated States (llllless otlre~ise '114ica1ed, ior every
`ki1u:I of national protection available): AE, AO, AL, AM,
`AT, AU, AZ, BA, BB, BG, BR. BW,BY, BZ. CA, CH, CN,
`CO, CR. CU, CZ. DE, DK, DM, DZ. EC, EE, EO, ES, Fl,
`GB, GD, GE, GH, GM, HR. HU, ID, ll., IN; IS~ JP, KE,
`KG, KM, KN, KP, KR, Kz.·LC. LK, LR, LS, LT, LU, LV,
`LY. MA, MD, MG, MK, MN, MW, MX, Mz, NA, NO, Nl,
`NO, NZ. OM, PG, PH, PL. PT, Ro; RU, SC, so; SE; SG,
`SK, SL, SM, SY, TJ, TM, TN, TR, TT, TZ, ·.uA, :uG, US,
`UZ. VC, VN, YU, ZA, ZM, 'ZW.
`.
`..
`
`(84) Designated States ( llllless o.tlrerwise indlcmed, ior evt!ry
`ki1u:I of regional protection available): ARIPO (BW, GH,
`GM, KE, LS, MW, MZ, NA, SD, SL, SZ, TZ, UG, ZM,
`'ZW), Eurasian (AM, AZ, BY. KO, Kz, MD. RU, TJ, TM),
`European (AT, BE, BO, CH,.CY, CZ, DE, DK, EE, ES, Fl,
`. FR, GB, GR, HU, IE, IS, IT, lJ', LU, LV. MC, NL, PL, PT,
`RO, SE, SI, SK, TR), OAPI (BF, BJ, CP, CG, CI, CM, GA,
`GN, GQ, GW, ML, MR. NE, SN, TD,TG).
`
`Published:
`with inlemalional search repon
`before the expiration of tire ·time !'unit for ame/uung tire
`claims and to be republished i~ the event of receipt of
`amendments
`
`For two-letter codes and other abbreviations, refer to the "Guhi(cid:173)
`ance Notes on Codes and Abbreviations" appearing al the begin(cid:173)
`ning of each regular issue of tire PCT Gatt!Ue.
`
`(21) International Applkatlon Number:
`PCTIBP2006/003437
`
`(22) Ioternatlonal.Flllng Date:
`
`13 April 2006 (13.04.2006)
`
`(25) FIUng Language:
`
`(26) Publication Language:
`
`English·
`
`English
`
`(30) Priority Data:
`60/670,648
`
`13 April 2005 (13.04.2005) US
`
`(71) Applicant (for all designated Stales eJCcept US): PRO·
`TEOSYS AG [DE/DE]; Carl-Zeiss-Strasse 51, 55129
`Mainz(DE).
`
`(72) Inventor; and
`(75) Inventor/Applicant (for US only): SCHRATTEN·
`HOLZ, Andre (DEIDEJ; Hinter der Kirche 43, 55129
`Mainz(DE).
`
`(74) Agent: WEICKMANN & WEICKMANN; Postfach 860
`820, 81635 Mllnchen (DE).
`
`--
`
`_
`_
`-
`
`=
`
`::;;;;
`-
`
`---
`
`\C
`\C
`\C
`QO ________________________________________________________________________ ~
`
`e (54) Title: MEFLOQUINE, NELFINAVIR AND SAQUINAVIR AS NOVEL AGENTS FOR NEURODEGENERA11VE AND
`\0 (NEURO-) INFLAMMATORY DISEASES
`=
`.
`
`C'J (57) Abstract:· The present invention generally relates to the neuroprotective, anti-apoptotic and anti-inflammatory aetivity of
`N mefloquine, nelfinavir and saquinavir and derivatives thereof based on recently discovered interactions with prohibitin and estrogen
`0 receptors and the inhibition of mitochondrial voltage- dependent anion channel I. Thus, mefloquine, nelfinavir and saquinavir and
`
`:;;;;;... derivatives thereof may be used as medicaments for lhe prevention and/or ireaunent of neurodegenerative and inflammatory, partic-
`~ ularly neuroinflammatory diseases.
`.
`
`1 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/J 08666
`
`PCT/EP2006/003437
`
`-1-
`
`Mefloqulne, Nelfinavlr and Saqulnavtr as novel agents for·
`neurodegenerative and (neuro-)
`.
`Inflammatory diseases
`
`Description
`
`The present invention generally relates to the neuroprotective, anti-apoptotic
`and anti-inflammatory activity of mefloquine, nelfinavir and saquinavir and·
`derivatives thereof based on recenUy discovered interactions with prohlbltin
`and estrogen receptors and
`the
`inhibition of mitochondrial · voltage(cid:173)
`dependent anion channel" 1. Thus, mefloquine, nelfinavir and saquinavir and
`derivatives thereof may be used as medicaments for the prevention and/or
`of
`neurodegenerative
`and ·
`inflammatory.
`particularly
`treatment
`neuroinflammatory diseases.
`
`Nelfinavir (Viracepi®) and saquinavir (lnvirase® or Fortovase®) are k.nown as
`anti-HIV drugs called HIV protease inhibitors. Further HIV protease inhibitors
`of the same class of compounds are amprenavir (Agenerase®), indinavir
`(Crixivan®).
`loplnavir
`(Kaletra9),
`ritonavir
`(Norvire) and atazanavir
`(Reyataz8). These compounds are used for treatment of HIV.
`
`s
`
`10
`
`1s
`
`Nelfinavir
`
`is usually administered
`
`in
`
`the
`
`form of (3S-(2(2S* ,35*),
`
`3a,4alJ,8alJ))-N-(1, 1-dimethylethyl)decahydro-2-(2-hydroxy-3-((3-hydroxy-2-
`20 methylbenzoyl)amino )-4-(phenylthio )butyl)-3-isoquinolinecarboxamide; The
`compound, its manufacture, its mechanism of action and its clinical efficacy
`have been described In the state of the art.
`
`2 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`-2-
`
`Nelfinavir .
`
`Saquinavir is us_ually administered in the form of Saquinavir mesylate (S)-N(cid:173)
`
`(( aS)-a-( ( 1 R)-2-( (3S,4aS,8aS )-3-(tert-butylcarbamoyl)octahydro-2( 1 H)-
`
`s
`
`isoquinolyl)-1-hydroxyethyl) phenethyl)-2-quinaldamidosuccinamide mono(cid:173)
`methanesulfonate (salt); DRG-0164; Fortovase8 ; lnvirase8 ; Ro 31-8959/003;
`Saquinavir monomethanesulfonate salt; butanediamide, N(sup 1 )-(3-(3-
`(( (1, 1-dimethylethyl)amino)
`carbonyl)octahydro-2( 1 H)-isoquinolinyl)-2-
`hydroxy-1-
`(phenylmethyl)propyl)-2-( (2-quinolinylcarbonyl)amino )-.
`(35-(2
`
`10
`
`(1R*(R*),2S*),3a,4alJ,8aJ3))-. m~nomethanesulfonate (salt); N-[1-benzyl-2-
`
`6, 7,8,8a(cid:173)
`hydroxy-3-[[3-(tert-butylcarbamoyl)-1,2,3,4,4a,5,
`decahydroisoquinol-2-ympropyl)-2-(2-
`quinolylcarbonylamlno)succinamlde;
`methanesulfonlc acid. The compound, its manufacture, its mechanism of
`action and its clinical efficacy have been described in the state of the art.
`
`15
`
`3 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`-3-
`
`Saquinavir
`
`s
`
`10
`
`15
`
`20
`
`The assumed antiapoptotic properties of this class of compounds have
`already been disclosed (Badley A. D. In vitro and in vivo effects of HIV ·
`protease inhibitors on apoptosis. Cell Death Differ. (2005) Mar 11; [Epub
`ahead of print]; Phenix B. N., Lum J.J., Nie Z., Sanchez-Dardon J.. and
`Badley A. D., Antiapoptotic mechanism of HIV protease
`inhibitors: .
`preventing mitochondrial transmembrane potential loss; Blood. 98, 1078- ·
`1085 (2001)).
`
`· -Mefloquine (Lariam®)--is- known as an anti-malaria drug which has high
`efficacy
`in treating
`the widespread chloroquine-resistant Plasmodium
`falciparom strains. Mefloqulne is used both for prophylaxis and treatment of
`malaria and is relatively well tolerated.
`
`Mefloquine is usually administered in the form of mefloquine hydrochloride
`
`(R*, S* )-(+-)-a-2~ piperldiny/-2, 8-bis
`
`(trifluoromethy/)-4-quinollnemethanol(cid:173)
`
`DL-erythro-a-2-piperidyl-2,8-bls(trifluorornethyl)-4-
`monohydrochlorlde;
`quinolinemethanol monohydrochloride; WR-142490; Ro-21-5998; Lariam•.
`C11H11CIFeN20; mol wt 414.78. C 49.23%, H 4.13%, Cl 8.55%, F 27.48%, N
`6.75%, 0 3.86%. The compound, Its manufacture, its mechanism .of action
`and its clinical efficacy have been described extensively in C. J. Qhnm~cht
`
`4 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`-4-
`
`et al. J. Med. Chem. 14, 926 (1971); DE patent 28 06 909, CA. 90. 22838q
`(1979); U.S. patent 4,507,482; J. T. Blackwell, J. Med. Chem. , 17~ 210.
`(1974); M. W. Davidson et al, J. Med. Chem. 20, 1117 (1977); R. E. Brown.
`et al., Life Sci. 25, 1857 (1979); Photochemistry: G. A. Epling, U. C. Yoon,
`Chem. Letters 1982 (2), 211; Pharmacokinetics: D. E. SchwartZ ·.et. al.,:
`Chemotherapy (Basel) 28, 70
`(1982). HPLC determination: 1. M ..
`Kapetanovic et al, .1. Chromatog. 277, 209 (1983); G. M. Trenholme et al.,
`Science 190, 792 (1975); F. Tin et al. Bull. WHO 60, 913 (1982); J.M. Kofe: .
`Ekue et al., ibid. 61, 713 (1983); J.-M. de Souza ibid. 809, 815 and P. Lim In
`Analytical Profiles of Drug Substances vol. 14, K. Florey, Ed. (Academic
`Press, New York. 1985) pp 157-180 (all citations from Merck Index, 12"'
`edition, 1996).
`
`The relatively new antimalarial mefloquine (Lariam®) has become extremely .
`popular due to its efficacy in treating the wide-spread chloroquine-resistant
`Plasmodium falciparum strains. Mefloquine is known both for severe
`neurologic and psychiatric adverse effects associated with its use ...
`
`There have also been reports about neurotoxic effects of mefloquine at
`higher dosages (Rendi-Wagner P.· et al., Acta Trop. 81, 167-173 (2002).
`The mechanisms of these adverse effects are discussed controversially in
`_the_Jiterature. __ Joxic ~n~phalopatt)y _ ~pP-_e~r§. to_ b_e _on~_ of the serious
`neurological manifestations which
`is slowly reversible depending · on
`individual predisposition. Self-administration schemes can be therefore both
`most useful and dangerous due to expected benefits and poteniiai' risks.
`(Nicolas X. et al., Presse Med. 30, 1349-1350 (2001); Dow G. S. et al.,
`Antimicrob. Agents Chemother. 48, 2624-2632 (2004 ). There are indications
`that disruption of neuronal calcium homeostasis can induce an ER stress
`response at physiologically relevant concentrations, thus contributing to: the
`neurotoxicity of the drug in vitro (Dow G. S. et al., Malar. J. 2, 14 (2003).
`There are other indications, that mefloquine shows stereoselective brain
`uptake in humans and rats and is a substrate and an inhibitor of the efflux
`protein P-glycoprotein (Barraud de Lagerie S. et al., Br. J. Pharmacol. 141,
`
`5
`
`10
`
`15
`
`20
`
`25
`
`ao
`
`5 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/00J437
`
`-5-
`
`inhibits certain gap junction
`that mefloquine
`1214-1222 (2004)). Or,
`channels at concentrations between 1 and 100 µM (Cruikshank S. J. ·et al., .
`Proc. Natl. Acad. Sci. USA 101, 12364-12369 (2004)). Also,: it has ·been··
`reported that the (-)-(R,S)-enantiomer of mefloquine is a potent adei'losine
`A2A receptor antagonist (Weiss et al. ... (2003)) .. Moreover, other reports·
`
`show inhibition of volume-regulated and calcium-activated chloride channels .
`by mefloquine (Maertens et al., J. Pharmacol. Exp. Ther. 295, 2g.:.35 ,(2000)).
`
`The .crucial molecular features correlated with neurotoxicity are under. ·
`investigation and certain molecular features defining neurotoxicity are
`emerging. There is an important hydrogen bond acceptor (lipid) function, an
`aliphatic hydrophobic function, and a ring aromatic function specifically
`distributed in the 3D surface of the molecule. Mapping of the 3D structures
`of a series of structurally diverse quinolines to the pharmacophore allowed
`accurate qualitative predictions of neurotoxicity (or not) to be made (Dow G.
`S. et al., supra ·(2004)).
`
`In contrast to reports on neurotoxicity other reports cite· mild side effects
`(Wattanakoon Y. et al., Southeast Asia J. Trop. Med. Public Health 34, 542-
`545 (2003)) or even recommend use of mefloquine during pregnancy (Adam
`I. et al., Saudi Med. J. 25, 1400-1402 (2004) or in infants (Dubos F. et al.,
`Pedlatr. Infect. Dis. J. 23, 679-618 (2004)). Interestingly, there is a recent
`theoretical study coming to the conclusion that mefloquine, along with other
`approved heterocycllcs may have · neuroprotective properties, potentially
`acting on a mitochondrial target (Stavrovskaya I. G., et aL J. Exp. Med:. 200,
`214-222 (2004)). Moreover, a neuroprotective activity of mefloquiMe ·based
`on its activity as a purinergic receptor antagonist is suggested by Fletcher et
`al. (US Pat. 6,197,788), (-)-mefloquine is suggested to block purinergic
`receptors and
`is claimed
`for
`the
`treatment of movement or
`neurodegenerative disorders.
`
`Taken. together there are many suggestions of potential new targets of
`mefloquine and some controversy about the severity, nature and mechanism
`
`s
`
`10
`
`1s
`
`20
`
`25
`
`30
`
`6 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`-6-
`
`of the neurotoxic side effects~ There are thus no proven findings at· present
`regarding the sphere of medical application for mefloquine.
`
`In the present application novel modes of adion and novel t~rgets for
`s . meftoqulne, nelfinavir and saquinavir and derivatives thereof are described, .
`thus_ establishing novel medical applications. These novel targets and their •
`implication
`for medical applications, particularly
`in
`the
`field
`. of
`neuroprotectlon, are described below.
`
`10
`
`1s
`
`20
`
`25
`
`30
`
`The voltage-dependent anion selective channel-1 (VOA 1 ). is a constitutive
`mitochondrial protein which can
`induce pro-apoptotic mitochondrial
`membrane permeabilisation and thus a potential target for the design and
`development of therapeutic strategies.
`
`Since its introduction to clinical use in 1985, there have . been numerous
`reports of severe adverse neurological and psychiatric effeCts including
`acute psychosis, affective disorders, acute confuslonal states and seizures
`. (Le Bras M. et al., Histol. Histopathol. 20, 205-219 (2005)}.
`
`It has ·been showri that the voltage dependent anion seledive channel
`(VOA~) in the outer membrane is a specific benzodiazepine binding site :in
`mitochondrial membranes (Slocinska M. et al., Ada Biochim. Po. 54, 953-
`. 962 (2004 )). VDAC proteins have also been implicated In the pathology of
`models for amytrophlc lateral sclerosis. (ALS), a fatal neurodegenerative
`disease charaderized by progressive motor neuron death (Fukada ·K. et al.,
`Mol. Cell Proteomics 12, 1211-1223 (2004)). Moreover it has been shown
`· --that-VDAC-proteins-are-tyrosine-phosphorylated under .. hypoxic .c0nditions
`suggesting that tyrosine phosphorylation may then contribute to
`the
`modulation of VDAC protein fundion/conformation or interadion with other
`prot~ins (Liberatori S. et al., P~teomics 4, 1335-1340 (2004)). Also a rol~ as
`redox sensor has been suggested recently (Baker M. A. et al., Biofadors 21,
`215-221 (2004)). This relates very well to the experimental examples
`described below.
`
`7 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`-7-
`
`the context of potentially anti-apoptotic and cyto-/neuroprotective ·
`In
`properties of mefloquine, nelfinavir and saquinavlr described here it · Is -
`noteworthy that certain hydrophobic hormones like thyroid hormone exert . ·
`antiapoptotic effects via interaction with components of the mitochondrial -
`.
`.
`transition pore (Yehuda-Shnaidman E. et al., Endocrinology, (2005)). This:
`might_ re_late to the_ ~e_nt~?tion of the repressor of estrogen receptor related
`activity (REA) as a further protein labelled by the reactive mefloquine,
`nelflnavir and saqulnavir derivatives described in the examples below.
`
`.
`
`'
`
`Proh~bitins comprise a remarkably conserved protein family in eukaryotic.
`cells with proposed functions In cell cycle progression, cancer, cellular stress
`management, senescence, apoptosis, and the regulation of mitochondrial
`activities (Liu H. et al., Proteomics 10, 3167-3176 (2004}; Huang C. M. et ~I.,
`Mass Spectrom. Rev. (2004); Wang K. J. et al., World of Gastroenterol. 10,
`2179-2183, (2004}; Wang S. et al. EMBO J~ 23, 2293-2303 (2004); Gamble_
`s. c. et al., Oncogene 23, 2996-3004 (2004 ); Joshi B. et 'al. Biochem.
`Blophys. Res. Commun. 312, 459-466 (2003); Fusaro G. et al.,' J. Biol.
`Chem. 278, 47853-47861 (2003)). Two prohibitin homologues, Phb1 and
`Phb2, assemble into a high molecular weight complex of approximately 1.2
`MDa in the mitochondrial inner membrane, but a nuclear localization of Phb1 ·
`and Phb2 also has been reported (Tatsuta T. et al., Mol. Biol. Cell. 16·, 248-
`259, (2005)). Prohibitin is also a tumor suppressor enriched in membrane
`microdomains, called lipid rafts and associated with viral infectious and
`inflammatory pathways, potentially via mitogen-activated protein kinase (e.g.
`Sharma A. et al., Proc. Natl. Acad. Sci. USA 101, 17492-17497 (2004))·.
`
`_ -RecenLreports.Jist prohibitin-among __ the_secreted __ proteins ot_ adipocYtes
`(Wang P. et al., Cell. Mol. Life Sci. 61, 2405-2417, (2004) ), moreo~er it has
`been established as a vasc~lar marker of adipose tissue, which· was target
`of a· proapoptotic peptide as· an antiobesity experimental treatment (Kolonin
`M. G. et al. Nat. Med. 10, 625-632 (2004 )).
`
`Recent data suggest that estrogen may exert neuroprotective effects against
`
`5
`
`10
`
`15
`
`20
`
`25
`
`30
`
`8 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`~-amyloid-lnduced toxicity by activation of estrogen . receptor-mediated
`
`-8-
`
`.
`
`.
`
`pathways in cholinergic neurons as a model for the pathology of Alzheimer's
`disease. In addition, Intracellular estrogen receptors are up-regulated ·by
`.
`their cognate hormone even during exposure to neurotoxlc agents, like P-
`amyloid1-40 (Marin R. et al., Neuroscience 121, 917-926 (2003)). Estrogen·
`appears to be an important neuromodulatory molecule. REA (repre~sor of. ·
`estrogen receptor activity) encodes a 37-kDa protein that is an .ER-~elective:
`.
`coregulator.
`Its competitive reversal of steroid receptor coactivator 1:
`enhancement of ER activity and Its direct interaction with llganded ER .
`suggest that it may play an important role in detennining the sensitivity of
`estrogen target cells to antiestrogens and estrogens, especially in cancer
`(Montano M. M. et al., Proc. Natl. Acad. ~ci. USA 96, 6947-6952~ (1999);
`Simon S. L. et al., Cancer Res. 60, 2796-2799, (2000)). REA is recruited to
`the hormone-occupied ER, decreases the tran~.criptional activity of ER, both
`when ER is acting directly through DNA response elements as well ;as. when
`it Is tethered to other transcription factors. Administration of antisense REA .
`increase
`in . ER transactivatlon, implyin~ that
`in a 2-4-fold
`resulted
`endogenous REA nonnally dampens the stimulatory response to estradiol
`(Delage-Mourroux R. et al., J. Biol. Chem. 275, 35848-35856, (2000)).·
`.
`.
`
`Estrogen antagonists are universally employed in the breast cancer therapy.
`The molecular mechanisms by which
`these agents
`inhibit eellular
`proliferation in breast cancer cells are not fully defined. Recent studies h~ve
`shown the involvement of the E2F (family of transcription factors) pathway in
`tamoxifen-induced growth arrest. E2F repressor, like prohibitin · and the
`chromatin modifiers Brg1/Brm are required for estrogen antagonist-mediated
`----growth-supp(ession through the-estrogen--receptor, a-ncf that-their recruitment
`to native promoter-bound E2F is induced via a JNK1 pathway. Collectively,
`these findings suggest that the prohibitin/Brg1/Brm node is a majcir cellular
`target
`for
`estrogen
`antagonists,
`and
`thereby
`also
`implicate
`prohibitin/Brg1/Brm as potentially important targets tor breast cancer therapy
`(Wang S. et al., supra, (2004 )).
`
`s
`
`10
`
`1s
`
`20
`
`2s
`
`30
`
`9 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`-9-
`
`Of particular interest Is the . recently discovered interaction of REA With
`histone deacetylases, which have drawn
`interest as potential
`neuroprotective targets (Langley B. et al., Curr. Drug Targets CNS Neurol. ·
`Dlsord. 4, 41-50, (2005)). Acetylation and deacetylatlon of hlstone protein,
`plays a critical role in regulating gene expression in a host of biological ·
`processes Including cellular proliferation, development, and differentiation.:
`Accordingly, aberrant acetylation and deacetylatlon resulting from the. ·
`misregulation of histone acetyltransferases
`(HATs) and/or histone
`deacetylases (HDACs) has been linked to clinical disorders ~uch as:
`Rubinstein-Taybi syndrome, fragile X syndrome, leukemia, and various
`cancers. Aberrant HAT and HDAC activity may also be a common
`underlying mechanism contributing to neurodegeneration during acute and
`chronic neurological diseases,
`including stroke, Huntington's disease
`Amyotrophic Lateral Sclerosis and Alzheimer's disease (Langley B. et al.
`supra, (2005)).
`
`Hlstone acetyltransferases and deacetylases are recruited by transcription
`factors and adapter proteins to regulate specific subsets of targ~t genes ..
`The repressor of estrogen receptor activity (REA) has been ideritifled a~· a
`novel HDAC1-associated protein. REA also associates with the' clas5 II
`hlstone deacetylase HDACS (Kurtev V. et al., J. Biol. Chem 279~ 24834-
`24843, (2004)).
`
`Estrogen and REA also appear to play a role in pathological processes in the
`eye: Despite the high prevalence of age-related cataracts, . there are
`currently no known therapies to delay or prevent their occurrence. Stu.dies in
`-- humans- and ·rodent·-models ·suggest that ·estrogen may- provide- protection
`against age-related cataracts. The discovery of ocular estrogen receptors
`(ERs) indicates that estrogen protection may resuH from direct interactions
`with its receptors in the eye, instead an indirect consequence from effects on
`another tissue. (Davis V. L. et al., Proc. Natl. Acad. Sci. USA 99, 9427-9432,
`(2002)).
`
`5
`
`10
`
`15
`
`20
`
`25
`
`30
`
`10 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`- 10-
`
`According to the results described in the examples of the present application ·
`it was found · that mefloquine, nelfinavir and saquinavir and· related·
`compounds interact with prohibitin and estrogen receptor repressor (REA)
`and. inhibit VDAC-1. Based on these results it is demonstrate.d that
`mefloquine, nelfinavir and saquinavir and
`related compounds have
`cytoprotective and particularly neuro-protective efficacy. Since a ecimmon
`feature of the different cellular challenges described in the examples of the·
`present application
`is an
`initial cytotoxic calcium overload · which
`subsequently leads to inflammatory and apoptotlc events, mefloqulne,
`nelfinavir and saquinavir and related compounds are suitable for the
`prevention and/or treatment of diseases which are caused by, associated
`with or accompanied by calcium overload and inflammatory and/or apoptotic
`events.
`
`5
`
`10
`
`1s
`
`Thus, a first aspect of the present invention relates to the use of a oompound
`of formulae (1 ), (2), (3). (4) or (5)
`
`(1)
`
`(2)
`
`20
`
`11 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`- 11 -
`
`(3)
`
`R.__ /'• •.. K
`R/
`(c\"-NH
`
`Offs
`
`4
`
`R
`1
`
`.
`
`13
`
`N
`
`0
`
`NH
`.
`~
`(4)
`
`5
`
`(5)
`or an optical isomer. a salt or derivative thereof for the manufacture of a
`cytoprotective medicament, particularly a medicament for the prevention or
`
`12 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 20061108666
`
`PCT/EP2006/0034J7
`
`..; 12-
`
`treatment of a disease associated with an inflammatory component, e.g. a
`neurological or non-neurological inflammatory disease.
`
`5
`
`10
`
`1s
`
`20
`
`25
`
`30
`
`In the compounds of the formula (1)
`
`R1, ~and~ are independently from each other hydrogen, C,-Ce-(halo)alkyl,
`or ~-Cr(halo)cycloalkyl, wherein the alkyl or cycloalkyl group: is:
`optionally substituted with a five- or ·six-membered ring qptionally·
`containing at least one heteroatom selected from N, S and 0, and·
`wherein the ring is optionally monosubstituted up to polysubstituted
`with halo, C1-C4-(halo)alkyl, C1-C4-(halo)alkoxy, amino, C,-C4-
`alkylamino, di(C1-C4-alkyl)amino or Z, wherein Z Is a C1-Cr(halo)alkyl
`group (1)-Substituted with a group -NR&Re , wherein Rs and Re are
`independenUy from each other hydrogen, C1-Cralkyl, or CO-C,-Ca-alkyl
`or wherein Rs and Re together form a five- or six-membered ring
`optionally containing at least one further heteroatom selected from N, S
`and 0, wherein
`the ring
`Is optionally monosubstituted up
`to
`polysubstituted with halo, C1-C4-(halo)alkyl and C1-C4(halo)alkoxy and
`Ra is hydrogen, C1-Ce-(halo)alkyl, CrCa-(halo)cycloalkyl, or -NR1Rs wherein
`R1 and Ra are independently from each other hydrogen, C,-Ca-alkyl~ or
`CO-C1-Ca-alkyl or wherein R1 and Rs
`together form a five- or six(cid:173)
`membered ring optionally containing at least one further heteroatom.
`selected
`from N, S and 0, wherein
`the
`ring
`is optionally
`monosubstltuted up to polysubstituted with halo, C1-C4-(halo)alkyl and
`C1-C4-(halo)alkoxy.
`
`In the compounds of the formulae (2) and (3)
`R, is hydrogen, C1-Cr(halo)alkyl, or CrCr(halo)cycloalkyl, wherein the alkyl
`or cycloalkyl group is optionally substituted with a five- or six-
`membered ring optionally containing at least one heteroatoi'n' selected
`from N,. S and 0, and wherein the ring is optionally mono- or pt>ly(cid:173)
`substituted with halo, C,-C,-(halo)alkyl, CrC4-(halo)alkoxy, amino, C1-
`C4-alkylamino, dl(C,-C4-alkyl)amino or Z, wherein Z is a CrC6-(halo)
`
`13 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`-13-
`
`-
`
`Rz
`
`alkyl group w-substituted with a group -NR,Ra; wherein R, and Ra are •
`.
`.
`independently from each other hydrogen, C1-Ce-alkyl, or CO-C,.;..~s-alkyl .
`or wherein R, and Ra together -form a five- or six-membered ring
`C?Ptionally c0ntalning at least one further heteroatom selected from N, S .
`and 0, wherein
`the ring
`is optionally ·monosubstituted up
`to
`polysubstitut~d with halo, C1-C4-(halo)alkyl and C1-C4-(halo)alk~xy.
`is hydrogen, halogen, C1-Ca-(halo)alkyl, or CrCa-(halo)cycloalkyl, _
`-NRaR10, wherein Ra and R1o are Independently from ea~h other :
`_hydrogen, C1-Ce-alkyl, or CO-C1-Cralkyl or wh~rein Ra and R,o -
`together form a five- or .six-membered ring optionally containing at least
`one further heteroatom selected from N, S and 0, wherein the ring is
`optionally monosubstituted up to polysubstituted with halo, C,-C4-(halo) .
`alkyl and C,-C4·(halo)alkoxy,
`~is hydrogen, C,-Ca-(halo)alkyl, or CrCa-(halo)cycloalkyl, halogen, OR11,
`wherein R11 is C,-Ca-(halo)alkyl, or ~-Ca-(halo)cycloalkyl,
`~ is hydrogen, C,-Ca-(halo)alkyl, or ~-Ca-(halo)cycloalkyl, CO-C1-C8-alkyl,
`Rs Is hydrogen, C1-Ca-(halo)alkyl, CrCa-(halo)cycloalkyl or CO-C1-Ca-alkyl
`and
`Ra is hydrogen, C1-Ca-(halo)alkyl, C3-Ca-(halo)cycloalkyl or CrCa-alkYlnyl.
`
`In the compounds of the formula (4)
`
`R, is hydrogen, hydroxy or NHRz,
`~ is hydrogen, alkyl, alkenyl, alkynyl, arylalkyl, heterocyclylalkyl, cycloalkyl,
`alkylcarbonyl, cycloalkylcarbonyl, arylcarbonyl, heterocyclylcarbonyl,
`arylalkylcarbonyl, heterocyclylalkylcarbonyl, alkoxycarbonyl, · arylalkyl
`oxycarbonyl, heterocyclylalkoxycarbonyl, aryl, heterocyclyl, · suifonyl,
`alkylsulfonyl, arylsulfonyl, heterocyclylsulfonyl or a group of the formula
`
`5
`
`10
`
`15
`
`20
`
`25
`
`. fa
`,....Ny
`
`R7
`
`x
`
`30
`
`wherein X is 0 or S and
`
`14 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`-14-
`
`R1 and Ra are independently from each other hydrogen, alkyl, aryl,
`heterocyclyl~ arylalkyl, heterocyclyl alkyl or
`R1 and Ra together witti the nitrogen atom to which they are attached
`form a saturated ring optionally containing a further heteroatom. or
`a group
`
`wherein R1o is hydrogen, alkyl, arylalkyl, heterocyclylalkyl, aryl,
`heterocyclyl when n=O and Y is 0 or S or
`R,o is hydrogen, alkyl, arylalkyl, heterocyclylalkyl, aryl, heterocyclyl
`when n=1, Y Is N, Re is hydrogen or alkyl or
`Rg and R1o form together with the heteroatom to which they are
`attached a heterocyclic ring when n=O and Y Is N, 0 or S, ·and
`R11 and R,2 independently are hydrogen or alkyl or
`R,, and R12 form together with the carbon atom to which they are
`attached a ring,
`R:i, ~ are independently from each other hydrogen, alkyl, carbamido, or
`~. ~ form together with the carbon atom to which they are attached a
`carbocyclic ring,
`Rs is hydrogen or the residue of an inorganic or an organic ester and
`Ra Is alkyl, arylalkyl, heterocyclylalkyl, alkyloxyalkyl, hydroxyalkyl, amino
`alkyl, fluoroalkyl and
`R13 is aryl, oralkylaryl, oralkylarylether or co-alkylarylthloether.
`
`In the compounds of the formula (5)
`
`R, is alkyl, arylalkyl, heterocyclylalkyl, alkoxyalkyl, hydroxyalkyl, alkylamino,
`aminoalkyl, fluoroalkyl,
`R2 is hydrogen or th.a residue of an inorganic or an organic ester,
`~ is aryl, co-alkylaryl, co-alkylaryl ether or co-alkylaryl thioether and
`
`5
`
`10
`
`15
`
`20
`
`25
`
`15 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCTIEP2006/003437
`
`~is aryl.
`
`- 15-
`
`s
`
`10
`
`The use of mefloquine for the manufadure of a medicamenf f~>r the
`prevention or treatment of a disorder which is disclosed· in US. 6, 197 ,788 is :
`exempted from the use according to the present invention.
`
`The compounds of formulae (1), (2) and (3) and its pharmaceutically
`acceptable salts may be prepared as described in the citations indicated in·
`the Merck Index, 121t1 edition, 1996 (cf; citations indicated on page 3 to 4).
`
`The compounds of formulae (4) and (5) and its pharmaceutically acceptable
`salts may be prepared as described in the state of the art.
`
`The general terms according· to the present invention used herein above and
`below preferably have the following meanings:
`
`15
`
`"Halon is, for example, fluorine, chlorine, bromine or iodine.
`
`20
`
`If not indicated differently, •alkyl" is related to s~turated, stralght.:.chaln' or
`branched hydrocarbon radicals having 1 to 4, 5, 6, 8, 9 or 10 carbon atoms,
`e.g. C1-Cs alkyl such as methyl, ethyl, propyl, 1-methylethyl, butyl, 1-
`methylpropyl, 2-methylpropyl, 1, 1-dimethylethyl, pentyl, 1-methylbutyl, 2-
`methylbutyl, 3-methylbutyl, 2,2-dimethylpropyl, 1-ethylbutyl,' hexyl, 1, 1-
`dimethylpropyl, 1,2- dimethylpropyl, 1-methylpentyl, 2-methylpentyl, 3-
`25 methylpentyl, 4-methylpentyl, 1, 1-dimethylbutyl, 1-ethylbutyl, 2-ethylbutyl,
`1, 1,2-trimethylpropyl, 1,2,2-trimethylpropyl, 1-ethyl-1-methylpropyl and· 1-
`ethyl-2-methylpropyl. -
`
`30
`
`·crCa-alkyl" Is, for example, methyl, ethyl, n-propyl, isopropyl,' n-butyl,
`isobutyl, sec-butyl, tert-butyl, n-pentyl, neopentyl, n-hexyl, n-heptyl or n-octyl,
`preferably CrC4-alkyl, especially methyl or ethyl, and more especially
`methyl.
`
`16 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`-16-
`
`.,Alkylcarbonyla are straight-chain or branched alkyl groups having 1 to 10 ·.
`carbon atoms (as mentioned above), which are bonded to the ~tructure via a
`carbonyl group (-CO-).
`
`s
`
`10
`
`. 15
`
`20
`
`25
`
`30
`
`.,Alkylsulfonyl• are straight-chain or branched alkyl groups having • 1 · to 10
`carbon atoms (as mentioned above), which are bonded to the structure v1a·a
`sulfonyl group (-SOz).
`
`,,Alkeny1• are unsaturated, straight-chain or branched hydrocarbon· radicals
`having 2 to 10 carbon atoms and a double bond in any desired position, e.g.
`CrCralkenyl such as ethenyl, 1-propenyl, 2-propenyl.
`
`,,Alkylnyla are straight-chain or branched hydrocarbon groups having 2·to 10
`carbon atoms and a triple bond in ~ny desired position, e.g. CrCa-alkynyl.
`
`.(Halo)alkyl° are straight-chain or branched alkyl group having 1 to 4 carbon
`atoms (as mentioned above) which are optionally substituted by at lt:tast one
`halo, substituent up to perhalogenation.
`
`.,Alkoxy" are straight-chain or branched alkyl groups having 1 to 10 or 1 to 10
`carbon atoms (as mentioned above), which are bonded to the·. structure via
`an oxygen atom (-0-).
`
`,,Alkoxycarbonyl" are straight-chain or branched alkoxy groups having 1: to
`10 carbon atoms (as mentioned above), which are bonded to the structure
`via a carbonyl group (-CO-) .
`
`• Cycloalkyl• are monocyclic alkyl groups having 3 to 12 carbon ring
`members, e.g. Ca-Ca-eycloalkyl such as cyclopropyl, cyclobutyl~ cyclopentyl,
`cyclohexyl, cycloheptyl and cyclooctyl.
`
`"CycloalkylcarbonylD Is a monocyclic alkyl group having 3 to 12, e.g.:3 to 6, 8
`to 12 carbon ring members (as mentioned above), which is bonded to the
`
`17 of 74
`
`PENN EX. 2285
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 2006/108666
`
`PCT/EP2006/003437
`
`structure via a carbonyl group (-CO-).
`
`- 17-
`
`s
`
`10
`
`15
`
`20
`
`2s
`
`30
`
`"~-Cr(Halo)cycloalkyl• are monocyclic alkyl groups with 3 to 8 ca~o.n ring·
`members, eg. CrCa-cycloalkyl such as cyclopropyl, cyclobutyl, cyclopentyt,:
`cyclohexyl, cycloheptyl and cyclooctyl which are optionally substituted by at
`least one halo substitutent up to perhalogenation.
`
`"C1-C4-(Halo)alkoxy" are straight-chain or linear alkyl groups. with 1 to 4,
`carbon atoms which are bound to the structure by an oxygen atom (-0-) and:
`which are optionally substituted by at least one halo substitutent up to
`perhalogenatlon.
`
`"Alkylamino• are straight-chain or branched alkyl groups with 1 to 4 carbon
`atoms, which are bound to the s

This document is available on Docket Alarm but you must sign up to view it.


Or .

Accessing this document will incur an additional charge of $.

After purchase, you can access this document again without charge.

Accept $ Charge
throbber

Still Working On It

This document is taking longer than usual to download. This can happen if we need to contact the court directly to obtain the document and their servers are running slowly.

Give it another minute or two to complete, and then try the refresh button.

throbber

A few More Minutes ... Still Working

It can take up to 5 minutes for us to download a document if the court servers are running slowly.

Thank you for your continued patience.

This document could not be displayed.

We could not find this document within its docket. Please go back to the docket page and check the link. If that does not work, go back to the docket and refresh it to pull the newest information.

Your account does not support viewing this document.

You need a Paid Account to view this document. Click here to change your account type.

Your account does not support viewing this document.

Set your membership status to view this document.

With a Docket Alarm membership, you'll get a whole lot more, including:

  • Up-to-date information for this case.
  • Email alerts whenever there is an update.
  • Full text search for other cases.
  • Get email alerts whenever a new case matches your search.

Become a Member

One Moment Please

The filing “” is large (MB) and is being downloaded.

Please refresh this page in a few minutes to see if the filing has been downloaded. The filing will also be emailed to you when the download completes.

Your document is on its way!

If you do not receive the document in five minutes, contact support at support@docketalarm.com.

Sealed Document

We are unable to display this document, it may be under a court ordered seal.

If you have proper credentials to access the file, you may proceed directly to the court's system using your government issued username and password.


Access Government Site

We are redirecting you
to a mobile optimized page.





Document Unreadable or Corrupt

Refresh this Document
Go to the Docket

We are unable to display this document.

Refresh this Document
Go to the Docket