throbber
·~
`
`PCT···
`INTERNATIONAL APPLICATION PUBLISHED UNDER TIIE PATENT COOPERATION TREATY (PCT')
`
`WORLD INTELl..ECTIJAL PROPERTY ORGANIZATION
`International Bureau
`
`(51} International Patent Classlllcatlon 6 :
`A61K 31/445, 31/425, 31/22
`
`Al
`
`(11) International Publication Number:
`
`WO 98131367
`
`(43) International Publication Date:
`
`23 July 1998 (23.o7.98)
`
`(21) International Application Number:
`
`PCT/US98/00619
`
`(22} International Filing Date:
`
`13 January 1998 (13.01.98)
`
`(30) Priority Data:
`60/036,183
`
`17 January 1997 (17.01.97}
`
`us
`
`BRISTOL-MYERS SQUIBB COMPANY
`(71) Applicant:
`[US/US]; P.O. Box 4000, Princeton, NJ 08543-4000 (US).
`
`(81) Designated States: AL, AM, AT, AU,: AZ, BB,.BO, BR, BY,
`CA, CH, CN, CZ. DE, DK, EE, ES, Fl, GB, OE; HU, ll.,
`JS, JP, KB. KG, KP, KR, KZ, LK; LR, LS. LT, LU, LV,
`MD, MO, MK, MN, MW, MX, NO, NZ, PL, PT, RO, RU,
`SD, SE, SO, SI, SK, TJ, TM, TR, TI, UA; UG, UZ, VN,
`ARIPO patent (GH, GM, ~ LS, MW, SD, SZ.· UG, ZW),
`Eurasian patent (AM, AZ, BY, KG, Kz, MD, RU, TJ, TM),
`European paterit (AT, BE, CH, DB, DK, ES, Fl, FR, GB,
`GR, IE, IT, LU, MC, NL, PT, SE), OAPI patent (BF, . .BJ,
`CF, CG, Cl, CM, GA, GN, ML, MR, NE, SN, TD, TG).
`
`(72) Inventors: GREGG, Richard, E.; 7 Linden Lane, Pennington, Published
`NJ 08534 (US). WHITERAU, John, R., ·n; 190 Rugby
`With international search report.
`Drive, Langhorne, PA 19047 (US).
`Before the expiration of the time "limit for amending the
`claims and to be republished in the evenl of the receipt of
`amendments.
`
`(74) Agents: RODNEY, Burton et al.; Bristol-Myers Squibb Com~
`pany, P.O. Box 4000, Princeton, NJ 08543-4000 (US).
`
`(54) Title: METiiOD FOR TREATING ACID LIPASE DEFICIENCY DISEASES WITH AN MTP INHIBITOR AND CHOLESTEROL
`LOWERING DRUGS
`
`(57) Abstract
`
`A method is provided for inhibiting or treating diseases associated with acid lipase deficiency by administering to a patient an MTP
`inhibitor, alone or optionally, in combination with another cholesterol lowering drug, such as pravastatin.


`
`1 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`Codes used 10 identify Slates party to the PCT on the front pages of pamphlets publishing international applications under lhe PCT.
`
`FOR THE PURPOSES OF INFORMATION ONLY
`
`AL
`AM
`AT
`AU
`AZ
`BA
`BB
`DE
`BF
`BG
`BJ
`DR
`UY
`CA
`Cl'
`cc
`CH
`Cl
`CM
`CN
`cu
`CZ
`DE
`DK
`EE
`
`Albanill
`Armenia
`AU!lria
`Australia
`A=baijan
`Bosnia and Hcrzc:govina
`Barbados
`Belgium
`Burkina Paao
`Bulgaria
`Benin
`Bruil
`llelaTUS
`Canada
`Central African Republic
`Congo
`Swilzerland
`COie d' lvoire
`Cameroon
`China
`Cuba
`Czech Republic
`Gcnnan:y
`Denmark
`Estonia
`
`ES
`F1
`FR
`GA
`GB
`GE
`GH
`GN
`GR
`HU
`IE
`IL
`IS
`IT
`JP
`KE
`KG
`KP
`
`KR
`KZ
`LC
`LI
`LK
`LR
`
`Spain
`Finland
`l'nna:
`Osbon
`United Kingdom
`Georgia
`Ghana
`Guinea
`Greece
`Hung&I')'
`Ireland
`Israel
`la: land
`llaly
`Japan
`Kenya
`Kyrgyutan
`Democ:ralic People• a
`Republic or Korea
`Republic or Komo
`Kazabtan
`Saini Lucia
`Liecluenstcin
`Sri Lanka
`Uberia
`
`LS
`LT
`LU
`LV
`MC
`MD
`MG
`MK
`
`ML
`MN
`MR
`MW
`MX
`NE
`NL
`NO
`NZ
`PL
`Pr
`RO
`RU
`SD
`SE
`SG
`
`Lesotho
`Lilhuanio
`Luxcmbowg
`Lal via
`Monaco
`Republic or Moldova
`Madllll8SC&r
`The former Yugoslav
`Republic of Macedonia
`Mali
`Mongolia
`Maori1ania
`Malawi
`Mexia>
`Niger
`Nethcrlanda
`Norway
`New Zealand
`Poland
`Ponugal
`Romani.a
`Rusaian Federation
`Sudan
`Sweden
`Singapore
`
`SI
`SJt
`SN
`sz
`TD
`TG
`TJ
`TM
`TR
`1T
`UA
`UC
`us
`uz
`VN
`YU
`zw
`
`Slovc1ila
`Slovakia
`Senegal
`Swaziland
`Chad
`Togo
`Tajitislan
`1'1rkmcnis1an
`Turkey
`Trinidad and Tobago
`Ulnainc
`Uganda
`United Slalel of America
`Uzbekistan
`Viet Nam
`Yugmlavia
`Zimbabwe
`
`2 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`. WO 98/31367
`
`PCT/US98/00619
`
`ME'IlfOD FOR TREATING ACID LIPASE DEFICIENCY DISEASES wrm AN MTP INHIBITOR AND CHOLESTEROL
`LOWERING DRUGS
`
`s
`
`10
`
`Field of the Invention
`The preserit invention related to a method for ·
`inhibiting or treating diseases associated with acid.lipase
`deficiency, including Wolman disease and/or cholesteryl
`ester storage disease, by administering an MTP inhibitor
`alone or in combination with another cholesterol lowering
`drug, such as pravastatin.
`
`IS
`
`20
`
`Background of the Invention
`Wolman disease and cholesteryl ester storage disease
`are characterized by a deficiency in activity of lys~mal
`acid lipase which results in massive accumulation of
`cholesteryl esters and triglycerides in most tissues·of·the
`body. Cholesteryl esters and triglycerides are derived
`from plasma lipoproteins taken up by the cells and are
`substrates for acid lipase. Acid lipase is responsible for
`the hydrolysis of cholesteryl esters and triglycerides· in
`the lysosomes.
`If plasma cholesterol levels are lowered
`sufficiently, then cholesteryl ester and triglyceride
`accumulation in the lysosomes and the consequences of the
`accumulation could be minimized.
`Wolman disease is the more severe of the two
`diseases and is almost always fatal before the age of l
`30 year.
`In contrast, cholesteryl ester storage disease may
`go undetected until adulthood by which time lipid
`deposition is widespread. Hyperbetalipoproteinemia is
`common in cholesteryl ester storage disease, and premature
`atherosclerosis may be severe.
`To date, there has been no specific therapy for acid
`lipase deficiency other than attempts at suppression of
`cholesterol synthesis and apolipoprotein B production by
`
`25
`
`35
`
`- 1 -
`
`3 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`W098/J1367
`
`PCT/US98/00619
`
`5
`
`JO
`
`15
`
`3-hydroxy-3-methylglutaryl coenzyme A reductase inhibitors
`in combination with cholestyramine treatment and a diet
`excluding foods rich-in cholesterol and triglycerides. The
`above apparently provided improvement in only one or two
`cases of cholesteryl ester storage disease. Thus, for the:
`most part, Wolman disease and cholesteryl ester stofage
`disease have been untreatable.
`See Scriver, C.R. et al "The Metabolic and Molecular
`.Bases of Inherited Disease", Vol. II (1995), Chap. 82,
`"Acid Lipase Deficiency: Wolman Disease and Cholesteryl
`Ester Storage Disease•, pp. 2563-2587.
`Until now, there have not been any therapeutic
`agents available which could lower plasma cholesterol
`levels sufficiently to minimize cholesteryl ester and
`triglyceride accumulation in the lysosomes.
`The microsomal triglyceride transfer protein (MTP)
`catalyzes the transport of triglyceride .(TG), cholesteryl
`ester (CE), and phosphatidylcholine (PC) between small
`unilamellar vesicles (SUV). Wetterau & Zilversmit, Chem.
`Phys. Lipids Jj!, 205-22 (1985). When transfer rates are
`expressed as the percent of the donor lipid transferred per
`time, MTP expresses a distinct preference for neutral lipid
`transport (TG and CE), relative to phospholipid transport.
`The microsomal triglyceride transfer protein from bovine
`liver has been isolated and extensively characterized (1).
`This has led to the cloning of cDNA expr~ssing the protein
`from several species, including humans (2). MTP is
`composed of two subunits. The small subunit is the
`previously characterized multifunctional protein, protein
`30 disulfide isomerase. This is supported by biochemical
`analysis of the protein (3) as well as co-expression
`studies performed in insect Sf9 cells using the baculovirus
`expression system. Expression of soluble active MTP
`requires the co-expression of PDI and the unique large
`subunit of MTP (4) .
`
`20
`
`25
`
`35
`
`- 2 -
`
`4 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`W098/31367
`
`PCT/US98/00619
`
`l:
`Wetterau, J.R. and Zilversinit, D.B.
`Phys. Lipids 38, 205-222.
`Wetterau, J.R., et al, (1990} J. Biol. Chem .. 265,
`9800-9807.
`Wetterau, J.R., et al, (1991} Biochemistry 30, 4406-
`
`(1985} Chem.
`
`4412.
`
`Atzel, A;, and Wetterau, J.R.
`32, 10444-10450.
`Atzel, A., and Wetterau, J.R. (1994) Biochemistry
`33, 15382-15388.
`Jamil, H., et al, (1995) J. Biol. Chem. 270, 6549-
`
`(1993.) Biochemistry
`
`6554.
`
`5
`
`10
`
`2.
`
`15
`
`Sharp, D. et al, (1993) Nature 365, 65-69.
`Lin, M.C.M., et al, J. Biol. Chem. 269, 29138-29145.
`Nakamuta, M., et al, (1996) Genomics 33, 313~3l6.
`
`Wetterau, J.R., et al, (1990) J. Biol. Chem. 265,
`3.
`9800-9807.
`Wetterau, J.R., et al, (1991} Biochemistry 30, 9728-
`
`9735.
`
`4.
`14285.
`
`Ricci, B., et al, (1995) J. Biol. Chem. 270, 14281-
`
`20
`
`25
`
`30
`
`.In yitro, MTP catalyzes the transport of lipid
`molecules between phospholipid memb~anes. Presumably, it
`plays a similar role in yiyo, and thus plays some role in
`lipid metabolism. The subcellular· (lumen of the microsomal
`fraction) and tissue distribution (liver and intestine) of
`MTP have led to speculation that it plays a role in the
`assembly of plasma lipoproteins, as these are the sites of
`plasma lipoprotein assembly. Wetterau & Zilversmit,
`Biochem. Biophys. Acta .e.22., 610-7 (1986). The ability of
`35 MTP to catalyze the transport of TG between membranes is
`consistent with this hypothesis, and suggests that MTP may
`catalyze the transport of TG from its site of synthesis in
`
`- 3 -
`
`5 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`W098/31367
`
`PCT/US98/00619
`
`5
`
`15
`
`the endoplasmic reticulum (ER) membrane to nascent
`lipoprotein particles within the lumen of the ER.
`Abetalipoproteinemia is an autosomal recessive
`disease characterized by a virtual absence of plasma
`lipoproteins which contain apolipoprotein B (apoB). Kane &
`Havel in The Metabolic Ba.sis of Inherited Disease, Sixth
`edition, 1139-64 (1989). Plasma TG levels may be as low as
`a few mg/dL, and they fail to rise after fat ingestion.
`Plasma cholesterol levels are often only 20-45 mg/dL.
`10 These abnormalities are the result of a genetic defeqt in
`the assembly and/or secretion of very low density
`lipoproteins (VLDL) in the liver and chylomicrons in'the
`intestine. The molecular basis.for this defect had not
`been previously detennined.
`In subjects examined,
`triglyceride, phospholipid, and cholesterol synthesis
`appear normal. At autopsy, subjects are free of
`atherosclerosis. Schaefer et al., Clin .. Chem. 34, B9-12
`(1988). A link between the apoB gene and
`abetalipoproteinemia has been excluded in several families.
`20 Talmud et al., J Clin Invest. 82, 1803-6 (1988) and Huang
`et al, Am· J. Hum Genet
`.4..2,; 1141-8 (1990).
`Recent reports (5) demonstrate that the defect
`causing abetalipoproteinemia is in the MTP gene, and as a
`result, the MTP protein. When examined, individuals with
`abetalipoproteinernia have no MTP activity, as a result of
`mutations in the MTP gene, some of which have been
`characterized. These results indicate that MTP is required
`for the synthesis of apoB containing lipoproteins, such as
`VLDL,
`the precursor to LDL.
`It therefore follows that
`inhibitors of MTP would inhibit the synthesis of VLDL and
`LDL, thereby lowering VLDL levels, LDL levels, cholesterol
`levels, and triglyceride levels in animals and man.
`
`25
`
`30
`
`5.
`
`35
`
`Wetterau, J.R., et al, (1992) Science 258, 999-1001.
`Sharp, D., et al, (1993) Nature 365, 65-69.
`Ricci, B., et al, (1995) J. Biol. Chem. 270, 14281-
`
`14285.
`
`- 4 -
`
`6 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 98131367
`
`PCT/US98/00.619.
`
`Shoulders, C.C., et al, (1993) Hum. Mol. Genetics
`2, 2109-2116.
`Narcisi, T.M.E., et al, (1995) Am. J. Hum. Genet.
`57, 1298-1310.
`Rehberg, E. F. , et al, J. Biol . Chem (in press) ..
`
`5
`
`10
`
`20
`
`Canadian Patent Application No. 2,091,102 publisped
`March 2, 1994 (corresponding to U.S. application Sefrial No.
`117,362, filed September 3, 1993 (file DC2lb)) which is
`incorporated herein by reference), reports MTP inhibitors
`which also block apoB containing lipoprotein secretion in a
`human hepatic cell line (HepG2 cells). This provides
`further support for the proposal that an MTP inhibitor
`would lower apoB containing lipoprotein and lipid levels .in
`15 Yi.YQ. This Canadian patent application discloses a method
`for identifying the MTP inhibitors.
`The use of microsomal triglyceride transfer protein
`(MTP) inhibitors for decreasing serum lipids including
`cholesterol and triglycerides and their use in treating
`atherosclerosis, obesity, hyperglycemia, and pancreatitis
`is disclosed in WO 96/26205, published August 29, 1996,
`U.S. Application Serial No. 472,067, filed June 6, 1995
`(file DC2le), U.S. Application Serial No. 548,811, filed
`January 11, 1996 (file DC2lh), U.S. provisional application
`25 No. 60/017,224, filed May 9, 1996 (file HX79a*}, U.S.
`provisional application No. 60/017,253, filed May 10, 1996
`(file HX82*), U.S. provisional application No. 60/017,254,
`May 10, 1996 (file HX84*) and U.S. provisional application
`No. 60/028,216, filed October l, 1996 (file HX86*).
`All of the above U.S. applications are incorporated
`herein by reference.
`
`30
`
`35
`
`Description of the Invention
`In accordance with the present invention, a method
`is provided for inhibiting or treating a disease associated
`with acid lipase deficiency, including Wolman disease
`and/or cholesteryl ester storage disease (CESD), in
`
`- 5 -
`
`7 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`. WO 98/31367
`
`PCT/US98/00619
`
`10
`
`15
`
`mammalian species, wherein a therapeutically effective
`amount of a microsomal triglyceride transfer protein (MTP)
`inhibitor is administered to a patient in need of
`treatment.
`The MTP inhibitor may optionally be administered in
`combination with another cholesterol .lowering drug or
`delipidatirig agerit.
`The MTP inhibitor alone or optionally in :combination
`with another cholesterol lowering drug is administered
`systemically, such as orally or parenterally or
`transdermally, to patients in need of treatment.
`In accordance with the present invention, the MTP
`inhibitor lowers plasma cholestero_l (LDL-cholesterol) to at
`least about 50% of normal LPL blood level, preferably down
`to less than about 25% of normal, and most preferably down·
`to less than about 15% of normal, and lowers trigly~~~ides
`to at least about 50% of normal triglyceride blood level,
`and preferably down to about 25% or less of normal, and.
`thereby minimizes cholesteryl ester and triglyceride
`accumulation in the lysosomes .
`The terms "another cholesterol lowering drug or
`agent" or "another delipidating drug" will be employed
`interchangeably herein.
`MTP inhibitors to be employed in the methods of the
`invention include MTP inhibitors disclosed in Canadian
`Patent Application No. 2,091,102 described hereinbefore
`(corresponding to U.S. Application Serial No. 117,362), WO
`92/26205 published August 29, 1996, U.S. Application Serial
`No. 472,067, filed June 6, 1995 (file DC2le), U.S.
`30 Application Serial No. 548,811, filed January 11, 1996
`(file DC2lh), U.S. provisional application No. 60/017,224,
`filed May 9, 1996 (file HX79a*), U.S. provisional
`application No. 60/017,253, filed May 10, 1996 (file
`HX82*), U.S. provisional application No. 60/017,254, filed
`35 May 10, 1996 (file HX84*), and U.S: provisional app~ication
`No. 60/028,216, filed October l, 1996 (file HX86*).
`
`20
`
`25
`
`- 6 -
`
`8 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`. WO 98131367
`
`PCTIUS98/00619 :
`
`Preferred are each of the preferred MTP inhibitors·
`disclosed in each of the above applications.
`All of the above u .. S. applications are incorporated
`herein by reference.
`The MTP inhibitors disclosed in U.S. Application
`Serial No. 472, 067, filed· June 6, 1995 (file DC2le) ·a.re
`piperidine ·compotinds of the structure
`R2
`0
`
`W·~N-CN-R1
`~x·
`R4
`
`,
`
`or
`
`or
`
`or
`
`or
`
`0
`"
`where Q Is -c- or
`
`ti
`
`0
`-S-
`11
`0
`
`Xis: CHR8, -c- -CH-CH- or
`• I
`I
`0
`Re
`R10
`
`II
`
`-C= C- ·
`I
`I
`'
`Rs Rto
`
`Ra, R9 and RlO are independently hydrogen, alkyl, alkenyl,
`alkynyl, aryl, arylalkyl, heteroaryl, heteroarylalkyl,
`cycloalkyl, or cycloaikylalkyl;
`
`Y is - (CB3 )m- or -~-
`0
`
`- 7 -
`
`5
`
`10
`
`15
`
`20
`
`25
`
`9 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`W098/31367
`
`PCT/VS98/00619
`
`5
`
`10
`
`15
`
`wherein mis 2 or 3;
`Rl is alkyl, alke_nyl, alkynyl, aryl, heteroaryl,
`arylalkyl wherein alkyl has at least 2 carbons,
`diarylalkyl, arylalkenyl, diarylalkenyl, arylalkynyl, .
`diarylalkynyl, diarylalkylaryl, heteroarylalkyl wherein
`alkyl has at least 2 carbons, cycloalkyl, or
`cycloalkylalkyl wherei~ alkyl has at least.2 carbons, all
`optionally substituted through available carbon atoms_ with.
`· .1, 2, 3 · or 4 groups selected from halo, haloalkyl, alkyl,.
`alkenyl, alkoxy, aryloxy, aryl, arylalkyl, alkylmercapto,
`arylmercapto, cycloalkyl, eye loalkylalkyl, heteroaryl ·,
`fluorenyl, heteroarylalkyl, hydroxy or oxo;
`or Rl is a fluorenyl-type group of the structure
`
`-.
`
`- R'1-z1
`
`or
`
`- R11-z1
`
`or
`
`~
`, ; . ~ 14
`R
`R
`
`~
`
`; or
`
`or
`
`_ R11_z1
`
`R12_ z2
`
`20
`
`R
`Rl is an indenyl-type group of the structure
`
`R13
`
`R14
`
`»'-:-...~
`
`or
`
`(a= 2,3 or4}
`
`-R11-z1
`R -z
`12
`2
`
`E
`
`- 8 -
`
`or
`
`R168
`
`. R15a
`
`10 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`. WO 98/31367
`
`PCT/US98/00619
`
`"~"
`
`R168
`
`(CH2}a
`
`- R11_z
`R -z
`12
`2
`Rtsa
`
`M
`
`or
`
`-R11-z1
`
`R13
`
`R14
`
`R1sa
`
`H
`
`R15a
`
`zl and z2 are the same or different and are
`independently a bond, 0, S,
`
`5
`
`IO
`
`15
`
`20
`
`25
`
`30
`
`, .
`
`s II
`0
`
`-NH-c-
`11
`o
`
`, -N - -c - ,
`I
`11
`alkyl 0
`
`or
`
`'.
`
`H
`-c-
`-~-
`" 0
`OH
`with the proviso that with respect to ~. at least one of zl
`and z2 will be other than a bond; Rll is a bond, alkylene,
`alkenylene or alkynylene of up to 10 carbon atoms; arylene
`or mixed arylene-alkylene; R12 is hydrogen, alkyl,
`alkenyl, aryl, haloalkyl, trihaloalkyl, trihaloalkylalkyl,
`heteroaryl, heteroarylalkyl, arylalkyl, arylalkenyl, cyclo(cid:173)
`alkyl, aryloxy, alkoxy, arylalkoxy or cycloalkylalkyl, with
`the provisos that preferably
`(1) when R12 is H, aryloxy, alkoxy or arylalkoxy,
`-NH-C-
`, -N -C -
`-c -
`l
`I
`11
`II
`11
`or a bond and
`o
`alkyl O
`o
`then z2 is
`(2) when z2 is a bond, R12 cannot be heteroaryl or
`heteroarylalkyl;
`Z is a bond, 0, S, N-alkyl, N-aryl, or alkylene or
`alkenylene from 1 to 5 carbon atoms; R13, R14, R15, and R16
`are independently hydrogen, alkyl, halo, haloalkyl, aryl,
`cycloalkyl, cycloheteroalkyl, alkenyl, alkynyl, hydroxy,
`alkoxy, nitro, amino, thio, alkylsulfonyl, arylsulfonyl;
`alkylthio, arylthio, aminocarbonyl, alkylcarbonyloxy,
`arylcarbonylamino, alkylcarbonylamino, arylalkyl,
`heteroaryl, heteroarylalkyl or aryloxy;
`R15a and R16a are independently hydrogen, alkyl,
`halo, haloalkyl, aryl, cycloalkyl,_cycloheteroalkyl,
`alkenyl, alkynyl, alkoxy, alkylsulfonyl, arylsulfonyi,
`alkylthio, arylthio, aminocarbonyl, alkylcarbonyloxy,
`
`- 9 -
`
`11 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`W098/31367
`
`PCT/US98/00619
`
`arylcarbonylamino, alkylcarbonylamin6, arylalkyl,
`heteroaryl, heteroarylalkyl, or aryloxy;
`or Rl is a group of the structure
`
`R17
`
`-(CB;i)p-<
`· R18
`
`wherein p is 1 to 8 and Rl7 and RlS are each independently
`H, alkyl, alkenyl, aryl, arylalkyl, heteroaryl,
`heteroarylalkyl, cycloalkyl or cycloalkylalkyl at least: one
`of Rl7 and RlS being other than H;
`or Rl is a group of the structure
`
`5
`
`IO
`
`15
`
`20
`
`wherein Rl9 is aryl or heteroaryl;
`R20 is aryl or heteroaryl;
`R21 is H, alkyl, aryl, alkylaryl, arylalkyl,
`aryloxy, arylalkoxy, heteroaryl, heteroarylalkyl,
`heteroarylalkoxy, cycloalkyl, cycloalkylalkyl or
`cycloalkylalkoxy;
`independently hydrogen, halo, alkyl,
`R2, R3, R4 are
`alkenyl, alkoxy, aryloxy, aryl, arylalkyl, alkylmercapto,
`arylmercapto, cycloalkyl, cycloalkylalkyl, heteroaryl,
`heteroarylalkyl, hydroxy or haloalkyl;
`Rs is independently alkyl, alkenyl, alkynyl, aryl,
`alkoxy, aryloxy, arylalkoxy, heteroaryl, arylalkyl,
`heteroarylalkyl, cycloalkyl, cycloalkylalkyl,
`polycycloalkyl, polycycloalkylalkyl, cycloalkenyl,
`cycloheteroalkyl, heteroaryloxy, cycloalkenylalkyl,
`polycycloalkenyl, polycycloalkenylalkyl,
`heteroarylcarbonyl, amino, alkylamino, arylamino,
`30 heteroarylamino, cycloalkyloxy, cycloalkylamino, all
`optionally substituted through available carbon.atoms with
`1, 2, 3 or 4 groups selected from hydrogen, halo, alkyl,
`haloalkyl, alkoxy, haloalkoxy, alk~nyl, alkynyl,
`cycloalkyl, cycloalkylalkyl, cycloheteroalkyl, cyclohetero-
`alkylalkyl, aryl, heteroaryl, arylalkyl, arylcycloalkyl,
`
`25
`
`35
`
`- 10 -
`
`12 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`W098/31367
`
`PCT/US98/00619
`
`5
`
`10
`
`15
`
`arylalkenyl, arylalkynyl, aryloxy, aryloxyalkyl,
`acylalkoxy, arylazo, heteroaryloxo, heteroarylalkyl", .
`heteroarylalkenyl, heteroaryloxy, hydroxy, nitre, c}rano,
`amino, substituted amino, thiol, alkylthio, arylthio,
`heteroarylthio, arylthioalkyl, alkylcarbonyl, arylcarbonyl,
`arylaminocarbonyl, alkoxycarbonyl, aminocarbonyl,
`alkynylaminocarbonyl, alkylaminocarbonyl,
`alkenylaminocarbonyl, alkylcarbonyloxy, arylcarbonylo:Xy,
`a;Lkylcarbonylamino, arylcarbonylamino, arylsulfinyl,·
`arylsulfinylalkyl, arylsulfonyl, alkylsulfonyl,
`arylsulfonylamino, heteroarylcarbonylamino,
`heteroarylsulfinyl, heteroarylthio, heteroarylsulfonyl,
`alkylsulfinyl;
`R6 is hydrogen. or C1-C4 alkyl or C1-C4 alkenyl; all
`optionally substituted with·1, 2, 3 or 4 groups which may
`independently be any of the substituents listed in the
`definition of Rs set out above;
`R7 is alkyl, aryl or arylalkyl wherein alkyl by
`itself or as part of arylalkyl is optionally substituted
`
`20
`
`with oxo ( W ) ;
`
`./:8~
`
`Het
`
`I
`
`and
`
`25
`
`30
`
`are the same or different and are independently selected
`from heteroaryl
`containing 5- or 6-ring members; and
`0
`~i1
`thereof; and
`
`N-oxides
`pharmaceutically acceptable salts thereof; with
`the provisos that preferably where in the first fonnula X
`is CH2, and R2, R3 and R4 are each H,
`then Rl will be other
`
`"-./ R
`
`than 3,3-diphenylpropyl, and preferably in the fifth
`fonnula, where one of R2, R3 and R4 is 6-fluoro, and the
`others are H, R7 will be other than 4-(2-methoxyphenyl).
`
`- 11 -
`
`13 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`W098131367
`
`PCT/US98/00619
`
`The MTP inhibitors disclosed in U.S. application
`Serial No. S48,811 filed January 11, 1996 (file DC2lh),
`have the structure
`
`x:a
`including the piperidine N-oxide thereof or a
`pharmaceutically acceptable salt thereof, wherein Z is a
`bond, 0 or S;
`xl and x2 are independently selected from H or halo;
`x is an integer from 2 to 6;
`RS is heteroaryl, aryl, heterocycloalkyl or
`cycloalkyl, each RS group being optionally substituted with
`l, 2, 3 or 4 substituents which may be the same or
`different.
`The MTP inhibitors disclosed in U.S. provisional
`application No. 60/017,224, filed May 9, 1996 (file HX79a*)
`have the structure
`
`5
`
`10
`
`15
`
`20
`
`25
`
`or
`
`IA
`
`or
`
`IB
`including pharmaceutically acceptable salts thereof,
`wherein q is 0, 1 or 2;
`A is
`(1) a bond;
`; or
`(2) -0-
`
`(3)
`where Rs is H or lower alkyl or Rs .together with R2 forms a
`carbocyclic or heterocyclic ring system containing 4· to 8
`members in the ring.
`
`- 12 -
`
`14 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`W098131367
`
`PCT/US98/00619
`
`B is a fluorenyl-type group of the structure.:
`
`./:
`
`......
`
`R~~1.n4' or
`~~v)l~)
`x
`
`~
`R
`
`~, 4
`R
`
`.A.
`
`.......
`
`R~n4' ~
`·1 .J
`.X ~4 R
`
`Het
`
`R3'
`
`or
`
`5
`
`(the above B Is also referred to as a
`fluorenyl- type ring or moiety); or
`
`B is an indenyl~type group of the structure
`
`3
`
`3'
`
`R,nR
`Hn3b
`
`R3a
`
`or
`
`or
`
`(a= 2,3 or4)
`R3
`
`(the above B Is also referred to as
`an indenyl-type ring or moiety);
`
`10
`
`15
`
`20
`
`Rx is H, alkyl or aryl;
`Rl is alkyl, alkenyl, alkynyl, alkoxyl, (alkyl or
`aryl)3Si (where each alkyl or aryl group .is independent),
`cycloalkyl, cycloalkenyl, substituted alkylamino,
`substituted arylalkylan\ino, aryl, arylalkyl, arylamino,
`aryloxy, heteroaryl, heteroarylamino, heteroaryloxy,
`arylsulfonylamino, heteroarylsulfonylamino, arylthio,
`arylsulfinyl, arylsulfonyl, alkylthio, alkylsulfinyl,
`alkylsulfonyl, heteroarylthio, heteroarylsulfinyl,
`heteroarylsulfonyl, -PO (R13) (Rl4), . (where R13 and R14 are
`independently alkyl, aryl, alkoxy, aryloxy, heteroaryl,
`heteroarylalkyl, heteroaryloxy, heteroarylalkoxy,
`
`- 13 -
`
`15 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 98/31367
`
`PCT/US98/00619
`
`cycloheteroalkyl, cycloheteroalkylalkyl, cycloheteroalkoxy,
`or cycloheteroalkylalkoxy); Rl can also be aminocarbonyl·
`(where the amino may-optionally be substituted with one.or.
`two aryl, alkyl or heteroaryl groups); cyano, 1,1-(alkoxyl
`or aryloxy) 2a~kyl (where the two aryl or alkyl subs ti tuent·s
`can be independently defined, or linked to one another to
`form a ring, such as 1,3-dioxane or 1,3-dioxolane,
`connected to Ll (or L2 in the case of R2) at the 2-:
`.position); 1,3-dioxane or 1,3-dioxolane connected tp Ll (or
`L2 in the case of R2) at the 4-position.
`The Rl group may have from one to four subst'ituents,·
`which can be any of the R3 groups or Rl groups, and any of
`the preferred Rl substituents set .out below.
`Rl may be substituted with the following preferred
`substituents: alkylcarbonylamino, cycloalkylcarbonylamino,
`arylcarbonylamino, heteroarylcarbonylamino, alkoxycarbonyl(cid:173)
`amino, aryloxycarbonylamino, heteroaryloxylcarbonylamino,
`uriedo (where the uriedo nitrogens may be substituted with
`alkyl, aryl or heteroa.ryl) , heterocyclylcarbonylamino
`(where the heterocycle is connected to the carbonyl group
`via a nitrogen or carbon atom), alkylsulfonylamino,
`arylsulfonylamino, heteroarylsulfonylamino,
`
`5
`
`10
`
`15
`
`20
`
`25
`
`30
`
`tc.20
`
`0
`
`N-
`.
`J
`
`21 -~
`R -1-
`h-
`,
`R22
`
`where J isz CHR2J, -c- -CH-CB- or -C=C- I
`' I
`I
`I
`I
`II
`~4 ~5
`~4~5
`0
`
`R23, R24 and R25 are independently hydrogen, alkyl, alkenyl,
`alkynyl, aryl, arylalkyl, heteroaryl, heteroarylalkyl,
`cycloalkyl, or cyclo.alkylalkyl;
`R20, R21, R22 are
`independently hydrogen, halo,
`alkyl, alkenyl, alkoxy, aryloxy, aryl, arylalkyl,
`alkylmercapto, arylmercapto, cycloalkyl, cycloalkylalkyl,
`heteroaryl, heteroarylalkyl, hydroxy or haloalkyl; and
`
`- 14 -
`
`16 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 98131367
`
`PCT/US98/00619
`
`5
`
`10
`
`these preferred substituents may either be directly
`attached to Rl, or attached via an alkylene chain at an
`open position.
`R2 is the same or different from Rl and is
`independently any of the groups set out for Rl, H,
`polyhaloalkyl (such as CF3CH2, CF3CF2CH2 or CF3) or
`cycloheteroalkyl; and may be substituted with one to four
`of any of the groups defined for R3, or any of the
`suhstituents preferred for Rl·
`Ll is a linking group containing from 1 to 10.
`carbons in a linear. chain (including alkylene, alke~ylene
`or alkynylene), which may contain, within the linking chain
`any of the following: one or two alkenes, one or two
`alkynes, an oxygen, an amino group optionally substituted
`15 with alkyl or aryl, an oxo group; and may be substituted
`with one to five alkyl or halo groups (preferably F).
`L2 may be the same or different from Ll and may
`independently be any of the Ll groups set out above or a
`singe bond.
`R3, R3', R4 and R4' may be the same or different and
`are independently selected from H, halogen, CF3, haloalkyl,
`hydroxy, alkoxy, alkyl, aryl, alkenyl, alkenyloxy, alkynyl,
`alkynyloxy, alkanoyl, nitro, amino, thiol, alkylthio,
`alkylsulfinyl, alkylsulfonyl, carboxy, alkoxycarbonyl,
`aminocarbonyl, alkylcarbonyloxy, alkylcarbonylarnino,
`cycloheteroalkyl, cycloheteroalkylalkyl, cyano, Ar, Ar(cid:173)
`alkyl, ArO, Ar-amino, Ar-thio, Ar-sulfinyl, Ar-sulfonyl,
`Ar-carbonyl, Ar-carbonyloxy or Ar-carbonylamino, wherein Ar
`is aryl or heteroaryl and Ar may optionally include l, 2 or
`3 additional rings fused to Ar;
`R3a and R3b are the same or different and are
`independently any of the R3 groups except hydroxy, nitro,
`amino or thio;
`
`20
`
`25
`
`30
`
`35
`
`and
`
`- 15 -
`
`17 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`W098/31367
`
`PCT/US98/00619
`
`5
`
`10
`
`15
`
`are the same or different and independently represent a 5 ·
`or 6 membered heteroaryl ring which may contain.l, .2, 3 or·
`4 heteroatoms in the~ring which are independently N, S or.
`O; and including N-oxides.
`X {in the fluorenyl type ring) is a bond, or is one·
`of the following groups:
`
`(1)
`
`(2)
`
`- s - .
`I
`(O)n•
`-o-
`
`(3) -N -
`I
`R&
`
`(4)
`
`(5)
`
`(6)
`
`(7) -,c,---y-
`R9
`RlO
`
`25
`
`20 wherein
`Y is 0, N-R6 or S;
`n' is 0, 1 or 2;
`R6 is H,
`lower alkyl, aryl, -C(O)-Rll or
`-C {O) -O-Rll;
`R7 and Rs are the same or different and are
`independently H, alkyl, aryl, halogen, -O-R12, or
`R7 and Rs together can be oxygen to fonn a ketone;
`R9, RlO, R9' and RlO' are the same or different and
`are independently H,
`lower alkyl, aryl or -O~Rll;
`R9" and Rio· are the same·or different and are
`independently H, lower alkyl, aryl, halogen or
`-O-Rll;
`
`30
`
`Rll is alky or aryl;
`
`- 16 -
`
`18 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`W098/31367
`
`PCTIUS98/00619
`
`R12 is H, alkyl or aryl.
`The following provisos apply to formula I preferred
`compounds:
`(a) when Rl is unsubstituted alkyl or unsubsti t1,ited
`arylalkyl, Ll cannot contain amino;
`(b) when Rl is alkyl, Ll cannot contain amino and
`oxo in adjacent positions (to form an amido group);
`(c) when R2L2A- is H2N-, RlLl cannot contain amino;
`(d) when Rl is cyano, Ll must have more than 2
`carbons;
`(e) RlLl must contain at least 3 carbons.
`With respect to compounds IA and IB, R2L2 cannot
`have an O or N atom directly attached to S=(O)q or CRX(QH),
`and for IA, R2L2 cannot be H.
`With respect to preferred compounds of fqrmula I~
`and IB, where Rl is cycloheteroalkyl, Rl is exclusi~e of 1-
`piperidinyl, 1-pyrrolidinyl, 1-azetidinyl or 1- (2-.oxo(cid:173)
`pyrrolidinyl) .
`The MTP inhibitors disclosed in U.S. provisional
`application No. 60/017,253, filed May 10, i996, (file
`HX82*) are pyrrolidine compounds and have the structure
`:I
`
`R3
`
`:I :I
`
`~·
`• i-· ~ ,N--D
`• ,,,,:; X
`R4
`
`N-R1
`
`W
`
`or
`
`RS/Q,~
`~R 1
`~6
`w
`
`0
`II
`whereQ is -c-
`
`0
`II
`or -s-
`11
`0
`
`W is H,H or O;
`
`Xis: CHR8, - C-
`11
`0
`
`-Ctt- CH-
`• I
`I
`R9
`R10
`
`or
`
`-C= C-;
`I
`I
`Re R10
`
`- 17 -
`
`5
`
`10
`
`15
`
`20
`
`25
`
`30
`
`19 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`W098/31367
`
`PCT/US98/00619
`
`Ra, R9 and RlO are independently hydrogen, alkyl, alkenyl,
`alkynyl, aryl, arylalkyl, heteroaryl, heteroarylalkyl,
`cycloalkyl, or cycloalkylalkyl;
`Rl is alkyl, alkenyl, alkynyl, aryl, heteroaryl,
`arylalkyl (wherein alkyl preferably has at least 2 carbons,
`more preferably at least 1 carbons), diarylalkyl,
`arylalkenyl, diarylalkenyl, arylalkynyl, diarylalkyhyl,
`diarylalkylaryl, heteroarylalkyl (wherein alkyl .preferably
`has at least 2 carbons, more preferably at least 3
`carbons), cycloalkyl, or cycloalkylalkyl (wherein alk}rl
`preferably has at least 2 carbons, more preferably at least
`3 carbons); all of the aforementioned Rl groups being
`optionally substituted through available carbon atoms with
`l, 2, 3 or 4 groups selected from halo, haloalkyl, alkyl,
`alkenyl, alkoxy, aryloxy, aryl, arylalkyl, alkylmerc~pto,
`arylmercapto, cycloalkyl, cycloalkylalkyl, heteroaryl,
`fluorenyl, heteroarylalkyl, hydroxy or oxo; or
`Rl is a fluorenyl-type group of the structure
`
`or
`
`or
`
`R12_z2 r ~
`R1i-' ~R14
`~
`
`5
`
`10
`
`15
`
`20
`
`or
`
`-R11-z1
`
`R12_z2
`
`R13
`
`; or
`
`25
`
`~
`Rl is an indenyl-type group of the structure
`
`- 18 -
`
`20 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`WO 98/31367
`
`PCT/US98/00619
`
`or
`
`E
`
`n12_z2 X
`R1sa (CH2 a
`
`g
`
`(a= 2,3 or4)
`
`of
`
`or
`
`zl and z2 are the same or different and are
`independently a bond, 0, S,
`
`5
`
`n15a
`
`0
`
`J
`
`II
`
`-N--C- I
`I
`II
`alkyl O
`
`-c-11
`0
`
`or
`
`H
`-~-
`OH
`
`s
`( ~} I -NH-C-
`" 0
`0
`2
`with the proviso that with respect to ~. at least one of zl
`and z2 will be other than a bond;
`Rll is a bond, alkylene, alkenylene or alkynylene of
`up to 10 carbon atoms, arylene (for example
`
`10
`
`-©---
`
`or mixed arylene-alkylene (for example
`~ -v(CH2>n-
`
`1s where n is 1 to 6 ;
`R12 is hydrogen, alkyl, alkenyl, aryl, haloalkyl,
`trihaloalkyl, trihaloalkylalkyl, heteroaryl,
`heteroarylalkyl, arylalkyl, arylalkenyl, cycloalkyl,
`aryloxy, alkoxy, arylalkoxy or cycloalkylalkyl; with the
`20 provisos that (1) when R12 is H, aryloxy, alkoxy or
`-NH-c-
`• -N -c -
`-c -
`..
`I.
`u
`u
`alkyl 0
`o
`O
`
`or a
`
`arylalkoxy, then z2 is
`bond;
`
`- 19 -
`
`21 of 61
`
`PENN EX. 2096
`CFAD V. UPENN
`IPR2015-01836
`
`

`
`W098/31367
`
`PCT/US98/00619
`
`5
`
`10
`
`15
`
`20
`
`25
`
`30
`
`.
`
`and (2) when z2 is a bond, R12 cannot be heteroaryl
`or heteroarylalkyl;
`z is a bond, 0, S, N-alkyl, N-aryl, or alkylene or
`alkenylene of from 1 to 5 carbon atoms;
`R13, R14, RlS, and Rl6 are independently hydrogen;
`.
`.
`alkyl, halo, haloalkyl, aryl, cycloalkyl, cycloheteroalkyl,
`alkenyl, aikynyl, hyd

This document is available on Docket Alarm but you must sign up to view it.


Or .

Accessing this document will incur an additional charge of $.

After purchase, you can access this document again without charge.

Accept $ Charge
throbber

Still Working On It

This document is taking longer than usual to download. This can happen if we need to contact the court directly to obtain the document and their servers are running slowly.

Give it another minute or two to complete, and then try the refresh button.

throbber

A few More Minutes ... Still Working

It can take up to 5 minutes for us to download a document if the court servers are running slowly.

Thank you for your continued patience.

This document could not be displayed.

We could not find this document within its docket. Please go back to the docket page and check the link. If that does not work, go back to the docket and refresh it to pull the newest information.

Your account does not support viewing this document.

You need a Paid Account to view this document. Click here to change your account type.

Your account does not support viewing this document.

Set your membership status to view this document.

With a Docket Alarm membership, you'll get a whole lot more, including:

  • Up-to-date information for this case.
  • Email alerts whenever there is an update.
  • Full text search for other cases.
  • Get email alerts whenever a new case matches your search.

Become a Member

One Moment Please

The filing “” is large (MB) and is being downloaded.

Please refresh this page in a few minutes to see if the filing has been downloaded. The filing will also be emailed to you when the download completes.

Your document is on its way!

If you do not receive the document in five minutes, contact support at support@docketalarm.com.

Sealed Document

We are unable to display this document, it may be under a court ordered seal.

If you have proper credentials to access the file, you may proceed directly to the court's system using your government issued username and password.


Access Government Site

We are redirecting you
to a mobile optimized page.





Document Unreadable or Corrupt

Refresh this Document
Go to the Docket

We are unable to display this document.

Refresh this Document
Go to the Docket