Deborah L. McGuinness, PhD
`
`Tetherless World Senior Constellation Chair
`Professor of Computer Science and Cognitive Science
`Rensselaer Polytechnic Institute
`
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`dlm@cs.rpi.edu
`518-276-4404 phone
`518-276-4464 Fax
`Twitter: @dlmcguinness
`
`
`
`
`1980
`B.S.
`B.A. 1980
`
`USA citizen; Clearance (on request)
`Social Security # (on request)
`http://www.cs.rpi.edu/~dlm
`
`Professional Preparation
`Computer Science
`
`Duke University
`
`Mathematics
`
`
`
`
`
`
`With Highest Honors
`
`
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`
`
`1981
`M.S
`
`University of California, Berkeley Computer Science
`Thesis Title:
`An Inferencing Language for Relational Geometric
`Databases
`
`Dr. Eugene Wong
`Knowledge Representation Ph.D. 1997
`Explaining Reasoning in Description Logics
`Dr. Alex Borgida
`
`
`
`
`
` Advisor:
`Rutgers University
` Thesis Title:
` Advisor:
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`Professional Experience
`
`1998-pres
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`2007- pres
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`Tetherless World Constellation (Endowed) Chair
`Rensselaer Polytechnic Institute, Troy, NY
`Professor of Computer Science
`Professor of Cognitive Science
`Founding Director of the Web Science Research Center (2008-pres)
`Director Health Analytics, IDEA
`CEO McGuinness Associates (Small Woman-Owned Consulting
`Business)
`2006- 2007 Acting Director and Senior Research Scientist – Knowledge Systems,
`Artificial Intelligence Laboratory, Stanford University, Stanford, CA
`2004- 2006 Co-Director and Senior Research Scientist – Knowledge Systems,
`Artificial Intelligence Laboratory, Stanford University, Stanford, CA
`1998-2004 Associate Director and Senior Research Scientist - Knowledge Systems
`Laboratory Stanford University, Stanford, CA;
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`1995-1998
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`Principal Member of Technical Staff - Artificial Intelligence Principles
`Research Department - Information Systems and Services Research-
`AT&T Laboratories Research
`1985-1995 Member of Technical Staff- Artificial Intelligence Principles Research
`Department - Information Systems and Services Research- AT&T Bell
`Laboratories. Rotational management position from ’96-97 as Emerging
`Technologies and Opportunities District Manager, Personal Online
`Services, AT&T Strategy and New Service Innovation.
`1980-1985 Member of Technical Staff, AT&T Bell Laboratories Home Information
`Systems (80-84), Computing Environments and Artificial Intelligence (84-
`85)
`
`
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`Professional Service
`
`Advisory Roles
`
` Gowild: Technology advisor for a technology company combining artificial intelligence
`with virtual reality and animation, comics, and games. (2016-present)
`
` Franz Inc.: Technology advisory board member for a technology company with
`expert knowledge in developing and deploying Semantic Web technologies and
`providing Common Lisp based tools that offer an ideal environment to create
`complex, mission-critical applications. (2009-present)
`
` Orbmedia: Technology advisory board member for a non-profit next generation
`journalism company focused on producing world-class journalism that strengthens
`global understanding of the interdependent world. (2011-present)
`
` Qualcomm: Advisor and consultant to the context aware mobile computing team.
`(2011-2012)
`
`Expert Witness
`
`Served as a consultant for numerous patent litigation cases, most of which are not public.
`I have testified in court, been deposed in legal offices, helped with due diligence,
`Markman hearing preparation, expert report preparation, deposition preparation and
`execution, and trial preparation and execution. Recently I have also helped prepare
`requests for post issuance review. I have worked on validity and infringement cases and
`have represented claimants and defendants.
`
`I served as an expert testifying witness in the Versata (Trilogy) vs. Sun Microsystems
`Civil Action No 2:06-CV-358-TJW case. I worked for Sun through the Skadden, Arps,
`Slate, Meagher & Flom legal firm. I authored an 800 page expert witness report, which
`succeeded in eliminating numerous claims from the suit, including one entire patent. I
`was deposed in this case and then further served as a testifying invalidity witness.
`Versata sought more than 100 million in damages and I helped the Sun side win the case,
`which was decided on April 27, 2009.
`
`http://www.eweek.com/c/a/Application-Development/Sun-Successfully-Defends-Itself-
`Against-100M-Patent-Suit-694198/
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`Previous Technical Advisory Boards (helped through acquisition)
`
` Applied Semantics: A knowledge organization solutions company. Acquired by
`Google in 2003.
`
` Blue Chip Expert: Technology advisory board member for a startup company
`supporting semantically-enabled fulfillment of executive and contract search requests.
`(bluechipexpert.com)
`
` Guru Worldwide: A new-generation staffing company. (www.guru.com) Acquired by
`Unicru (now www.kronos.com).
`
` Cerebra: Member of founding technology advisory board for a semantic web
`solutions company. Assisted in funding as well as technical aspects and supported
`due diligence prior to asset acquisition by WebMethods.
`
` Radar Networks – Member of the founding technology advisory board (2003-2010)
`for a startup company concerned with providing technology to support the next
`generation of the web, sometimes called Web 3.0. Additionally, helped obtain
`funding from Vulcan Capital to capitalize the company and supported due diligence
`during acquisition by EVRI in 2010.
`
` Tumri - Technology advisory board member for a context-oriented online content
`startup company.
`
` Katalytik - Technology advisory board member for a startup company concerned with
`improving healthcare through better health information technology.
`
`
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`Executive Council Member / Advisory Board / Leadership Team (Academic):
`
` 
`
`
`
` Smithsonium Encyclopedia of Life Advisory Board, 2013-present
` DataOne: (2011-present) – Senior leadership team member for first and largest NSF
`DataNet award. Co-Chair of the Interoperability and Semantics Working group.
` NIST Ontology Summit Advisory Board – (2008-2012). Appointed to advise on
`ontology research issues for annual ontology summit.
`Information and Communication Technology for Sustainable and Optimised Building
`Operation Scientific Advisory Board (2009-2011)– University College, Cork,
`Ireland.
` Oregon State University Ecosystem Informatics Division: (2006-2009 Phase 1 and
`2009-2011 Phase II) - Appointed advisory position for an interdisciplinary
`informatics division supporting ecosystem research.
`(http://oregonstate.edu/leadership/strategic-plan/informatics)
` Semantic Web Science Association. (2000-2006) - Founding advisory board member
`for the organization promotes scholarly work on the semantic web internationally.
`The organization oversees the international semantic web conference series, related
`conference proceedings, and the journal of web semantics.
`(http://swsa.semanticweb.org/)
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` American Association for Artificial Intelligence (1998-2002) - Elected advisor for the
`scientific society devoted to advancing scientific understanding of the mechanisms
`underlying thought and intelligent behavior and their embodiment in machines. This
`organization oversees and sponsors the yearly AAAI and IAAI conference series, two
`major yearly symposium series, multiple other scientific workshops, a quarterly
`magazine, and the affiliated AI Journal. (aaai.org)
`International Organization for Knowledge Representation and Reasoning. (2001-
`2004) - Appointed advisory board member for the scientific organization that fosters
`research and communication on knowledge representation and reasoning. The
`organization oversees the yearly international conference series, related proceedings,
`and KR-related mailing lists. (kr.org)
`International Organization for Description Logics, (2001-2003) - Elected steering
`committee member for the organization responsible for supporting research in
`description logics. The organization oversees the yearly description logic workshop,
`affiliated publications, and maintains online resources concerning description logics.
`(dl.kr.org)
`International Organization for Conceptual Structures, (2001-2003) Appointed
`editorial board member for the organization that promotes research on the formal
`analysis and representation of conceptual knowledge with applications to artificial
`intelligence, computational linguistics, and related areas of computer science. The
`organization also oversees a yearly international conference series, related
`publications, and online resources.
`
`
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`
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`Conference Program Chair/Co-Chair:
`Web Science, Albany NY, 2017 (title confirmed; conference yet to be held).
`
`Conference on Information and Knowledge Management, Lisbon, Portugal, November,
`2007
`American Association for Artificial Intelligence Conference, San Jose, Ca. July 2004
`International Knowledge Representation and Reasoning Conference, Toulouse France,
`April 22-25, 2002
`
`
`
`Selected Workshop General / Program Chair/Co-Chair:
`International Provenance and Annotation Workshop, General Chair, Troy, NY, June 14-
`17, 2010.
`
`Proof Combination and Evaluation Workshop at the International Joint Conference on
`Automated Reasoning (IJCAR), 2010
`Linked AI: AAAI Spring Symposium on Linked Data Meets Artificial Intelligence,
`Stanford, CA, March 22-24, 2010.
`Semantic Scientific Knowledge Integration, AAAI Spring Symposium , Stanford, CA,
`March 26-28, 2008.
`Earth and Space Science Cyberinfrastructure: Application and Theory of Knowledge
`Representation the American Geophysical Union Joint Assembly Fall Meeting, San
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`Francisco, CA, December 11-15, 2006.
`Contexts and Ontologies: Theory, Practice, and Applications. Riva del Garda, Italy.
`August 28, 2006.
`Earth and Space Sciences Ontology Workshop, Johns Hopkins University, Applied
`Physics Lab, Laurel, MD., May 26, 2006.
`Semantic Scientific Data Integration, the American Geophysical Union Joint Assembly,
`Baltimore, Maryland, May 23-25, 2006.
`Volcano Ontology Workshop. San Diego Super Computer Center, San Diego, Feb 15-16,
`2006. (Results to be presented at AGU06, May 2006).
`Ontologies for Earth and Space Sciences, Earth and Space Science Informatics. American
`Geophysical Union Fall Meeting, Moscone Center, San Francisco, December 8, 2006.
`Contexts and Ontologies: Theory, Practice, and Applications. AAAI Workshop,
`Pittsburgh, Pa., July 2005.
`IEEE Enterprise Distributed Object Computing Conference, Model-Driven semantic Web
`(MDSW 2004). Monterey, Ca., September 2004.
`Workshop on Configuration, International Joint Conference on Artificial Intelligence,
`Seattle, Washington, August 6, 2001.
`International Description Logic Workshop, August 1-3, 2001, Stanford, CA., USA
`International Semantic Web Workshop, July 30-31, 2001, Stanford, CA., USA . This
`was the first meeting of the international semantic web community and it has now turned
`into a conference series called the International Semantic Web Conference, which has
`been held every year since 2002.
`AAAI Fall Symposium Series Workshop on Configuration, Boston, Mass., November,
`1996,
`1996 International Workshop Description Logics, Boston, Mass., November, 1996,
`AAAI Fall Symposium Series Workshop on Issues in Description Logics: Users Meet
`Developers, Boston, Mass., 1992.
`
`Selected Organizing Committee (other than program or conference chair):
`International Semantic Web Conference 2002. Sardinia, Italy. Sponsor Chair, June 2002.
`Knowledge Representation and Reasoning 2000 Breckenridge, Colorado, Local
`Arrangements Chair USA, April, 2000.
`
`Journal Associate or Guest Editor:
`Journal of Earth Science Informatics (JESI - Springer), Founding Associate Editor, 2006-
`present.
`
`IEEE Intelligent Systems, Special Issue Editor on Semantic Scientific Knowledge
`Integration, 2009 24(1)
`
`Information Systems Journal on Information and Knowledge Management, guest editor,
`2009.
`ACM transactions on Internet Technology. Associate Editor, 2002-2006
`Electronic Transactions in Artificial Intelligence. Area editor for SEMWEB (Modeling
`Semantics of Web Information: Theory, Methods, and Applications), 2000-2001.
`AI-EDAM Journal, Special Issue on Configuration, Guest Editor, 1998.
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`Journal for Conceptual Systems, Special Issue on Knowledge Retrieval, Use, and Storage
`for Efficiency, Guest Editor, 1997.
`
`
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`Member
`W3C Provenance Working Group. 2011 –2014. Founding member and editor of the
`ontology recommendation note.
`NASA Technology Infusion Working Group, 2007-present
`W3C Provenance Incubator group. 2010-2011. Founding member of the group that led
`to the working group on provenance.
`W3C OWL Working Group. 2007 – 2012. Founding member and editor of one of the
`recommendation documents.
`W3C Semantic Web Best Practices Working Group. 2004-2006. Task Force Chair or Co-
`Chair for Ontology Engineering and Patterns.
`Darpa Executive Committee for Cyc Analysis - 2003-2005.
`W3C Web Ontology Working Group. 2001-2005. Lead author of the Overview for the
`W3C Ontology Web Language Recommendation, co-author of the Guide and Reference,
`and co-author of the W3C submission.
`Joint EU/US Adhoc Markup Language Committee - 2000-2005,
`Knowledge Representation System Specification group of the DARPA Knowledge
`Sharing Effort, 1990-1994,
`ARPA Knowledge Sharing Committee Effort on Interfaces to the External Environment,
`1990-1992,
`
`AAAI - Association for the Advancement of Artificial Intelligence, 1984-present,
`AAAS – American Association for the Advancement of Science,
`ACM - Association for Computing Machinery, 1988-present,
`AGU – American Geophysical Union, 2001-present
`ESIP – Earth System Information Partners, 2006-present
`IEEE – Institute of Electrical and Electronics Engineers
`New York New Media Association, 1997-2000,
`
`
`Industrial Gifts:
`
` MITRE, $150,000 2015-2016 (Joint with Hendler)
` Qualcomm, $135,000 from 2011-2013
` LGS Innovations, $50,000, 2011
` Elsevier, $ 10,000, 2011
` VerticalNet, $ 60,000, 2001-2004
` Cisco, $100,000, 2000
` Kodak, postdoctoral support – about $150,000 2006-2007
`
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`Grants
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`L. Schadler, D. McGuinness, K. Brinson, W. Chen. DIBBS: Ontology and
`Cyberinfrastructure for Polymer Nanocomposite Community Data Resource. From
`the National Science Foundation (NSF). 500,000. 9/16-3/19. This project aims
`expand the NanoMine resource for nanomaterials and provide an integrated semantic
`infrastructure and data resource for all those interested in designing and using nano
`materials.
`
`
`J. Samuels, P. Fox, J. Hendler, R. Hull, D. McGuinness. Data-Driven Design
`Paradigm for Part Qualification in Additive Manufacturing. From the Defense
`Advanced Research Projects Agency (DARPA). 400,000.. 6/16 – 3/17. This a
`project aims to provide a semantic infrastructure data resource for Additive
`Manufacturing
`
`S. Teitelbaum, C. Gennings, P. Kovatch, D. McGuinness. Child Health Exposure
`Analysis Repository Data Center. From National Institute of Environmental Health
`Sciences (NIH/NIEHS). 1,238,595. This is the RPI portion of the overall award to
`Mount Sinai. 9/1/15-8/31/19. The goal of the project is to design and implement an
`analysis center for exposure studies. McGuinness leads the Data Science core of the
`overall 9 million dollar award to Mount Sinai. The Data Center serves the entire 50
`million dollar overall Child Health Exposure Analysis Repository program.
`
`D. McGuinness, K. Bennett, B. Yener, C. Breneman, A. Dyson. Healthy Birth,
`Growth, and Development Knowledge Integration. From the Gates Foundation,
`Seattle, Washington. 353,917. May 2015-Aug 2016. The goal of the project is to
`develop a holistic, multidisciplinary, integrated approach to establish and deliver
`effective intervention that is tailored to local life cycle and pathology. McGuinness
`leads the ontology for global health effort
`
`D. McGuinness. Scalable Hypothesis Reasoning supporting the Analysis in Motion
`Initiative. From Battelle Memorial Institute Pacific Northwest Division. Pacific
`Northwest National Laboratory. Contract Number 249149. $ 295,545. 1/1/2015-
`9/30/2016. The project’s goal is to develop a symbolic reasoning platform that can
`continuously formulate and evaluate proposed hypotheses as new knowledge arrives
`from streams of propositions.
`
`K. Fortun, M. Fortun, D. McGuinness. Semantic Digital Infrastructures for the
`Empirical Humanities: Enabling Engagement with Complex Global Challenges. RPI
`Knowledge and Innovation Program. $100,000. 1/1/2015-12/31/2015.
`
`C. Collins, A. Dyson, K. Rogers, K. Bennett, K. Fortun, M. Fortun, D. McGuinness.
`Parameterizing the Microbiome in Built and Natural Environments. RPI Knowledge
`and Innovation Program. $139,628. 1/1/2015-5/31/2016.
`
`D. McGuinness. DataONE (observation Network for Earth). NSF DataNet Program.
`McGuinness Award: 408,730.00. 10/1/14-9/30/16. University of New Mexico Prime
`– total award over 25 million. The project’s goal is to enable new science and
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`knowledge creation through universal access to data about life on earth and the
`environment that sustains it. McGuinness co-leads the semantics and interoperability
`working group and is responsible for the semantic technology model.
`
`D. McGuinness. ReDrugS: Repurposing Drugs using Semantics, RPI-Mount Sinai
`Seedling, $19,500. 1/1/2014-12/31/2014. This project aimed to find new effective
`treatments for disease using approved drugs. Our approach was to gather and
`integrate existing data using semantic technologies to help discover promising drug
`repurposing from the causal perspective instead of simply using a correlative
`perspective.
`
`J. Hendler, D. McGuinness, Cloud-Oriented Social Media Inference and
`Counteraction (COSMIC), DARPA’s Social Media in Strategic Communication
`(SMISC) Program, (Subcontract to Sentimetrix Inc.), $1.2M, 01/23/2012 –
`05/10/2015. The goal of the project is leverage clouds and social media to better
`support inference. McGuinness was in charge of knowledge representation,
`modeling, and provenance.
`
`D. McGuinness. Healthcare Analytics Using Semantic Technologies, RPI Seed,
`$50,000. 2013.
`
`D. McGuinness. A Roadmap for Using Social Media to Gather First Responder
`Requirements. National Institute of Standards and Technology, $120,000.
`09/01/2012 – 02/28/2014. RPI J12428. The goal of the project is to develop a
`methodology for using social medial to gather first responder requirements.
`McGuinness led the model development and the semantic technology tools.
`
`D. McGuinness, J. Hendler, Foresight and Understanding from Scientific Exposition
`(FUSE), IARPA, (Subcontract to BAE Systems) $2,000,000/4yr, 8/11/2011 –
`05/07/2014. The project’s goal is to identify emerging topics in science and then to
`explain findings. McGuinness leads the semantic foundations, ontology model, and
`explanation work.
`
`M. Parsons, D. McGuinness, P. Fox, R. Duerr. International Network of Arctic
`Knowledge (INAK) / Semantic Sea Ice Interoperability Initiative (SSIII). National
`Science Foundation. (Subcontract to Regents of the University of Colorado). RPI
`award: $ 335,000, J40262. 10/1/2010 – 12/2014. With 15,000 supplement until
`9/30/2015 and 49,000 supplement pending. The project’s goal was to create an
`interdisciplinary research group around modeling sea ice and to create interoperable
`data. McGuinness co-led the ontology model and semantic eScience methodology.
`
`P. Fox, D. McGuinness. A Semantic eScience Framework: Facilitating Next
`Generation Data Intensive Science, $ 1,100, 000, 9/15/2009 - 8/31/2012. The
`project’s goal was to create a next generation tool suite for supporting eScience.
`McGuinness co-designed a semantic web methodology, which she now teaches
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`ugrad/grad classes on, which has been reused in dozens of science informatics
`projects.
`
`D. McGuinness. Social Networking Tools to Enable Collaboration in the Tobacco
`Surveillance, Epidemilogy, and Evaluation Network. NSF, Subcontract to
`Northwestern University. $ 131,287. 8/1/2010 - 2/29/2012. RPI6081. The goal of
`the project was to design and develop an evolving platform demonstrating how health
`behavior, policy, and demographic data can be integrated, visualized, and
`communicated to empower communities and support new avenues of research and
`policy for cancer prevention and control. McGuinness was responsible for the
`semantic technology, knowledge modeling, prototype building, and demonstrations.
`
`J. Hendler, D. McGuinness. Network Science Collaborative Technology Alliance
`(NS-CTA). ARL. RPI J71364.. Role: Senior Researcher. $640,423.86. 9/28/09 –
`9/27/13. The goal of the project is to advance networks science and create tools and
`methodologies for understanding, predicting, and influencing networks. McGuinness
`was in charge of semantic foundations and explaining network analysis.
`
`D. McGuinness. Explaining Cognitive Assistants that Learn and Organize. DARPA
`program. Subcontract to SRI. $ 155,097. 2/1/2008 - 3/31/2009.
`
`J. Hendler, D. McGuinness, Knowledge Acquisition for Human Terrain, DARPA,
`$150k/1yr (Seedling), subcontract to BBN Technologies, 8/1/2008 - 6/15/2009.
`D. McGuinness. Cognitive Assistant that Learns and Observes (CALO). DARPA
`Personalized Assistant that Learns Program, subcontract to Stanford University.
`$ 200,000, 9/7/2007 - 1/31/2008.
`
`Note on Stanford projects, as I was not a professor, I was not allowed to be a PI. I put
`the order according to who wrote the proposal and who ran it. I wrote and ran
`projects and provided all of the reporting when I was the project manager and
`proposal author.
`
`D. McGuinness, R. Fikes. Generalized Integrated Learning Architecture (GILA)
`Source of Support: DARPA Integrated Learning Program via subcontract to
`Lockheed Martin Advanced Technology Laboratories , PI Transferred to Thrun after
`McGuinness went to RPI. $ 1,784,670, 04/1/06 to 08/31/08 . The project explored
`machine learning and knowledge representation for next generation integrated
`learning environments. McGuinness led the knowledge modeling, ontology and
`explanation environments.
`
`M. Musen, D. McGuinness, et al. cBIO- National Center for Biomedical Ontology .
`NIH Biomedical Information Science and Technology Initiative (BISTI), Contract
`Number: U54 HG004028, Total Award Amount: $3,758,967 (Total Directs
`$3,208,226), 09/23/05 to 07/31/06
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`D. McGuinness, R. Fikes. Explainable Policies for Establishing Trust in Web
`Applications. NSF Cybertrust Transparent Accountable Data Mining. Subcontract to
`MIT. CoPIs: Berners-Lee, Weitzner. Contract No.: 5710001895 Award #0524481,
`My award: $285,000, Transferred Stanford PI to Thrun after McGuinness went to
`RPI. 09/01/05 to 08/31/08.
`
`
`R. Fikes, D. McGuinness. Interoperable Knowledge Representation for Intelligence
`Support (IKRIS). ARDA/DTO. Contract No.: DAAB07-03-CN206-60918.
`Subcontract to MITRE (PI: Maybury). $ 416,000, 02/14/05 to 06/30/06.
`
`D. McGuinness, R. Fikes. Explainable Knowledge Aggregation from Multiple
`Heterogeneous Information Sources. DARPA Seedling. Contract No.: HR0011-05-
`0019 , : $1,369,567 . 03/8/05 to 02/28/07.
`
`D. McGuinness, R. Fikes. Cognitive Information Processing Technology for the
`Enduring Personal Assistant., DARPA Personal Assistant that Learns (PAL)
`Program. Subcontract to SRI (PIs Perrault and Marks). Total Award over 28 million.
`My award: $3,161,925 , later added Thrun as Stanford PI after McGuinness moved to
`RPI. 04/23/03 – 09/30/07 .
`
`M. Musen, D. McGuinness, et al. A Resource for Biomedical Ontologies and
`Knowledge Bases. NIH., Contract Number: P41 LM007885 , $2,247,872 , 04/01/03
`to 05/31/06.
`
`R. Fikes, D. McGuinness. Knowledge Associates for Novel Intelligence (KANI),
`ARDA/DTO Novel Intelligence for Massive Data Program. Contract No.:
`2003*H278000*000 , $5,550,000 (Includes sub-awards to IBM and Battelle).
`12/06/02 – 06/30/00.
`
`R. Fikes, A. Fox, S. McIlraith, D. McGuinness. Semantic Services. Stanford
`Networking Research Center. $ 516,808. 10/1/02- 10/1/06
`
`
`R. Fikes, D. McGuinness, H. Garcia Molina. From the Web to the Global Infobase.
`NSF Knowledge Discovery and Dissemination (KDD). NSF-IIS-0085896. $212,500 ,
`10/01/02 - 3/31/03.
`
`R. Fikes, D. McGuinness. Representation and Reasoning Technology for Logistics
`Policies. DARPA Ultralog Program (add on to DAML project funds), $597,703 .
`02/01/02 - 01/31/05.
`
`R. Fikes, D. McGuinness. AQUAINT Question Answering (AQUA), ARDA
`Advanced Question Answering Program /DTO via subcontract to SAIC, Contract No:
`2002-H768000-000 , $ 570,000. 11/15/01 – 11/14/03.
`
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`D. McGuinness, R. Fikes. DARPA Integrated Learning Program award to Lockheed
`Martin (GILA), DoD Award (subcontract through Lockheed Martin – total award
`24M), Stanford, 1,784,670, 2007-2008.
`RPI, $800,000 11/1/07-12/31/2009 with J. Hendler
`
`D. McGuinness. CISCO Meta Data & Ontology Technology Project. $ 300,000.
`07/1/00 – 07/1/01.
`
`D. McGuinness, R. Fikes. Tools for DAML-Based Services, Document Templates,
`and Query-Answering. DARPA IXO, DARPA Agent Markup Language Program. :
`$3,373,833 . 06/29/00 to 11/30/06
`
`
`
`D. McGuinness, R. Fikes. Creating, Maintaining, and Integrating Understandable
`Knowledge Bases. DARPA Rapid Knowledge Formation Program through Navy
`SPAWAR. Contract No.: N66001-00-C-8027 . $1,626,572 , 04/19/00-04/17/04.
`
`R. Fikes, D. McGuinness. Large Scale Repositories of High Expressive Reusable.
`DARPA High Performance Knowledge Base program. Contract No.: N66001-96-C-
`8622. $ 2,554,793, 4/30/97 - 4/30/01
`
`
`
`Patents
`
`Issued
`1. US Patent 5720008: McGuinness, Patel-Schneider, and Resnick. "Knowledge Base
`Management System with Dependency Information for Procedural Tests", Issued
`2/17/98, Submitted 5/94.
`2. US Patent 5974405: McGuinness, Patel-Schneider, and Resnick. "Knowledge Base
`Management System with Enhanced Explanation of Derived Information", Issued
`10/26/99, submitted 5/94.
`3. US Patent 6256627: McGuinness, Resnick, Beattie, and Manning. "System and
`Method for Maintaining a Knowledge Base and Evidence Set". Issued July 3, 2001.
`Submitted 2/98, filed 6/23/98, allowed 12/29/00.
`4. US Patent 6385600: McGuinness, Beattie, and Resnick. "System And Method For
`Searching On A Computer Using An Evidence Set". Issued May 7, 2002, submitted
`4/3/98, allowed February 7, 2002. U. S. Application Number 09/054,886.
`5. US Patent McGuinness, Beattie, and Resnick. "System And Method For Maintaining
`A Knowledge Base And Evidence Set". submitted 2/98, Docket No. 112569 Division
`Filed: April 11, 2001, allowed May 20, 2002. U.S. Application Number 09/832,221.
`
`Publications
`
`Also see:
`1. Google Scholar - http://scholar.google.com/scholar?hl=en&q=deborah+mcguinness
`2. DBLP - http://www.informatik.uni-
`trier.de/~ley/pers/hd/m/McGuinness:Deborah_L=.html , and
`http://dblp.org/search/#query=deborah mcguinness
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`3. RPI Tetherless World Constellation McGuinness publications partial listing -
`http://tw.rpi.edu/web/person/Deborah_L_McGuinness/Publications
`4. Stanford Knowledge Systems Laboratory publications McGuinness publications
`partial listing:
`http://www.ksl.stanford.edu/abstracts_by_author/McGuinness,D..papers.html
`5. ResearchGate - https://www.researchgate.net/profile/Deborah_Mcguinness
`6. Academia.edu - https://rpi.academia.edu/DeborahLMcGuinness
`
`Books
`1. Franz Baader, Diego Calvanese, Deborah L. McGuinness, Daniele Nardi, and Peter F.
`Patel-Schneider, editors, The Description Logic Handbook: Theory, Implementation
`and Applications, Cambridge University Press, 2003. Second edition, 2006.
`2. Isabel Cruz, Stefan Decker, Jerome Euzenat, and Deborah L. McGuinness, editors.
`The Emerging Semantic Web. IOS Press, 2002. (Available from
`http://www.iospress.nl/site/html/boek-1381825766.html.)
`3. Joanne S. Luciano, Grant P. Cumming. Eva Kahana, Mark D. Wilkinson, Elizabeth H
`Brooks, Dominick DiFranzo, Holly Jarman, Deborah L. McGuinness, Margaret
`Levine, Cathy Pope. Health Web Science. Now Publishers Inc. Hanover, MA, USA ,
`2014.
`
`Conference Proceedings
`1. Deborah McGuinness, James Michaelis, and Luc Moreau. Provenance and
`Annotation of Data and Process. Springer. 2012.
`http://www.springerlink.com/content/978-3-642-17818-4#section=824603&page=1
`2. Deborah McGuinness and George Ferguson, Program Co-chairs. Proceedings of the
`Nineteenth National Conference on Artificial Intelligence (AAAI-04). AAAI Press,
`San Jose, California, July, 2004. Available from
`http://www.aaai.org/Press/Proceedings/AAAI/2004/aaai04.html .
`3. Dieter Fensel, Fausto Guinchiglia, Deborah McGuinness, and Mary-Anne Williams,
`editors. Knowledge Representation 2002: Proc. of the 8th International Conference
`(KR '02). Morgan Kaufmann Publishers, Toulouse, France, May 2002. Available
`from http://www.mkp.com/books_catalog/catalog.asp?ISBN=1-55860-847-8 .
`
`
`
`Journals
`
`1. James P. McCusker, Michel Dumontier, Rui Yan, Sylvia He, Jonathan S. Dordick,
`Deborah L. McGuinness. Finding Melanoma Drugs through a Probabilistic
`Knowledge Graph. PeerJ 4L 32007, 2016.
`2. Zheng JG, Howsmon D, Zhang B, Hahn J, McGuinness D, Hendler J, Ji H. Entity
`linking for biomedical literature. BMC Med Inform Decis Mak. 2015;15 Suppl
`1:S4. doi: 10.1186/1472-6947-15-S1-S4. Epub 2015 May 20.PMID: 26045232
`3. Patton, EW, Seyed P, Wang P, Fu L, McGuinness DL, Dein FJ, Bristol RS. (2014).
`SemantEco: A Semantically-powered Modular Architecture for Integrating
`Distributed Environmental and Ecological Data. Future Generation Computing
`Systems 36, pp. 430–440.
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`4. Joanne S. Luciano, Grant P. Cumming. Eva Kahana, Mark D. Wilkinson, Elizabeth
`H Brooks, Dominick DiFranzo, Holly Jarman, Deborah L. McGuinness, Margaret
`Levine, Cathy Pope. Health Web Science. Foundations and Trends in Web
`Science 4(4), 269-419, 2014.
`5. Duerr, Ruth E., McCusker, James, Parsons, Mark A., Singh Khalsa, Siri Jodha,
`Pulsifer, Peter L. , Thompson, Cassidy, Yan, Rui, McGuinness, Deborah L. Fox,
`Peter. Formalizing the semantics of sea ice. Earth Science Informatics
`September 2014. Springer, Berlin Heidelberg,
`http://dx.doi.org/10.1007/s12145-014-0177-z
`6. Michaelis, J., McGuinness, D.L., Chang, C., Erickson, J.S., Hunter, D., and Babko-
`Malaya, O. 2014. Explaining Scientific and Technical Emergence Forecasting. In
`Applications of Social Media and Social Network Analysis, pp 177-192 2015.
`7. Tilmes, Curt, Fox, Peter, Ma, Xiaogang, McGuinness, Deborah L., Privette, Ana
`Pinheiro, Smith, Aaron, Waple, Anne, Zednik, Stephan, and Zheng, Jin Guang.
`2013. Provenance Representation for the National Climate Assessment in the
`Global Change Information System. IEEE Transactions on Geoscience and Remote
`Sensing. 10.1109/TGRS.2013.2262179 Vol PP(99)
`http://homepages.rpi.edu/~max7/pdf/2013_Tilmes_ITGRS.pdf
`8. James P. McCusker, Timothy Lebo, Cynthia Chang, Deborah L. McGuinness, Paulo
`Pinheiro da Silva: Parallel Identities for Managing Open Government Data. IEEE
`Intelligent Systems 27(3): 55-62 (2012).
`9. Qing Liu, Quan Bai, Corne Kloppers, Peter Fitch, Qifeng Bai, Kerry Taylor, Peter
`Fox, Stephan Zednik, Li Ding, Andrew Terhorst and Deborah McGuinness. An
`ontology-based knowledge management framework for a distributed water
`information system. Journal of Hydroinformatics, IWA Publishing, 2012.
`http://www.iwaponline.com/jh/up/jh2012152.htm, doi:10.2166/hydro.2012.152.
`10. Paul Lukowicz, Sanjiv Nanda, Vidya Narayanan, Hal Albelson, Deborah L.
`McGuinness, Michael I. Jordan: Qualcomm Context-Awareness Symposium Sets
`Research Agenda for Context-Aware Smartphones. IEEE Pervasive Computing
`11(1): 76-79 (2012).
`11. Xiaoqin Zhang, Bhavesh Shrestha, Sung Wook Yoon, Subbarao Kambhampati,
`Phillip DiBona, Jinhong Guo, Daniel McFarlane, Martin O. Hofmann, Kenneth R.
`Whitebread, Darren Scott Appling, Elizabeth T. Whitaker, Ethan Trewhitt, Li Ding,
`James Michaelis, Deborah L. McGuinness, James A. Hendler, Janardhan Rao Doppa,
`Charles Parker, Thomas G. Dietterich, Prasad Tadepalli, Weng-Keen Wong, Derek T.
`Green, Antons Rebguns, Diana F. Spears, Ugur Kuter, Geoffrey Levine, Gerald
`DeJong, Reid MacTavish, Santiago Ontañón, Jainarayan Radhakrishnan, Ashwin
`Ram, Hala Mostafa, Huzaifa Zafar, Chongjie Zhang, Daniel D. Corkill, Victor R.
`Lesser, Zhexuan Song: An Ensemble Architecture for Learning Complex