throbber
Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 1 of 52 PageID: 334
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`Exhibit B
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`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 2 of 52 PageID: 335
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`
`IN THE UNITED STATES DISTRICT COURT
`FOR THE DISTRICT OF NEW JERSEY
`
`UNITED THERAPEUTICS
`CORPORATION,
`
`
`Plaintiff and Counterclaim-
`Defendant,
`
`
`v.
`
`
`
`
`
`SANDOZ INC.,
`
`
`Defendant and Counterclaim-
`Plaintiff.
`
`
`
`
`DECLARATION OF CLAYTON H. HEATHCOCK, Ph.D.
`
`
`
`
`
`
`
`
`)
`)
`)
`
`))
`
`
`
`))
`
`
`) Civil Action No.
`)
` 3:14-cv-5499 (PGD)(LHG)
`)
`
`)
`
`)
`
`I, Clayton H. Heathcock, hereby declare as follows:
`
`1.
`
`I have been retained by Sandoz Inc. as an expert in the above captioned
`
`matter. I submit this declaration in support of Sandoz’s Opening Claim
`
`Construction Brief.
`
`2.
`
`I have a Ph.D. in Chemistry from the University of Colorado, which I
`
`obtained in 1963. I held various professorial ranks in the Department of Chemistry
`
`at the University of California at Berkeley from 1964 through 2004. I was Dean of
`
`the College of Chemistry from 1999 through 2005 and Chief Scientist of QB3
`
`Berkeley, a branch of the California Institute for Quantitative Bioscience from
`
`2005 to 2008. I am currently Emeritus Professor.
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`1
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`

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`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 3 of 52 PageID: 336
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`3.
`
`For the more than 50 years, I conducted research in organic chemistry. In
`
`particular, my work focused on the chemical synthesis of complex, polycyclic
`
`natural products.
`
`4.
`
`I have published over 280 research papers and book chapters. I have
`
`served as Chair of the Division of Organic Chemistry of the American Chemical
`
`Society, Chair of the National Institutes of Health Medicinal Chemistry Study
`
`Section, Chair of the Gordon Research Conference on Stereochemistry, Chair of
`
`the Chemistry Division of the American Association for the Advancement of
`
`Science, and Editor-in-Chief of the Journal of Organic Chemistry and of the
`
`annual publication Organic Syntheses. I have received numerous awards and
`
`honors for my work in the field of chemistry. Noteworthy examples include the
`
`Ernest Guenther Award (ACS) (1986); ACS Award for Creative Work in Organic
`
`Synthesis (1990); A.C. Cope Scholar (1990); Prelog Medal, ETH (1991);
`
`American Academy of Art and Sciences (1991); National Academy of Sciences
`
`(1995); Centenary Medal, Royal Society of Chemistry (1996); H.C. Brown Award
`
`(ACS) (2002); Paul Gassman Award for Distinguished Service (ACS) (2004).
`
`Additional information regarding my background, experience, and credentials is
`
`set forth in my curriculum vitae, which is attached as Exhibit 1 to this declaration.
`
`2
`
`

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`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 4 of 52 PageID: 337
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`
`I.
`
`THE ’393 PATENT
`
`5.
`
`U.S. Patent No. 8,497,393 (“the ’393 patent”) is entitled “Process to
`
`prepare treprostinil, the active ingredient in Remodulin®.”1 I understand that the
`
`’393 patent issued on July 30, 2013 and claims priority to a provisional application
`
`filed on December 17, 2007.
`
`6.
`
`The ’393 patent has a total of 22 claims. I understand that UTC has
`
`asserted six claims in the present litigation: claims 1, 2, 4, 8, 9 and 16.
`
`7.
`
`Claim 1 recites as follows:
`
`
`
`
`
`
`
`
`
`
`1 A copy of the ’393 patent is attached as Exhibit 2 to my Declaration.
`
`3
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`

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`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 5 of 52 PageID: 338
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`8.
`
`Claim 1 is drawn to a product comprising a compound of a genus that
`
`includes the treprostinil compound, or a pharmaceutically acceptable salt thereof.
`
`9.
`
`Claim 9 is identical to claim 1 except that it is drawn to a product
`
`comprising the specific treprostinil compound, a species of the genus of claim 1,
`
`made by the same process.
`
`10. Each of the independent claims 1 and 9 includes limitations that the
`
`claimed compound is made by a process comprising three specified steps: (a)
`
`alkylating a benzindene triol to form a benzindene nitrile intermediate; (b)
`
`hydrolyzing the benzindene nitrile with a base to form treprostinil acid; and (c)
`
`contacting the treprostinil acid with a base to form treprostinil salt.
`
`4
`
`

`
`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 6 of 52 PageID: 339
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`11. Claims 2, 4, and 8 each depend from claim 1. Claim 2 adds the limitation
`
`that the purity of treprostinil in the final product be at least 99.5%. Claim 4 adds
`
`the limitation that the base in step (b) must be KOH or NaOH. Claim 8 adds the
`
`limitation that the product of step (a) is not purified.
`
`12. Claim 16 depends from claim 9 and adds the limitation that the process
`
`does not include purifying the product of step (a).
`
`13. The specification of the ’393 patent teaches a method of preparing a
`
`genus of compounds that includes treprostinil and its salts.
`
`14. This method involves starting with an intermediate called a “benzindene
`
`triol” and performing an alkylation step to convert the “benzindene triol” to a
`
`nitrile intermediate (step (a)). The next step involves hydrolyzing the nitrile
`
`intermediate to produce treprostinil acid (step (b)). Next, treprostinil acid is
`
`converted into treprostinil diethanolamine salt (step (c)). Finally, treprostinil
`
`diethanolamine salt may be converted back into treprostinil acid (optional step (d)).
`
`15. Embodiments of steps (a) through (d) are described in the examples of
`
`the ’393 patent.
`
`16. The first five examples illustrate the conversion of a particular
`
`benzindene triol intermediate into treprostinil acid by way of treprostinil
`
`diethanolamine salt. (Ex. 2, Col. 9:25-17:26).
`
`5
`
`

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`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 7 of 52 PageID: 340
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`17. Example 6 provides a “working example of the Process according to the
`
`present invention.” It combines all the required steps and many others into a
`
`commercial-scale embodiment of the process described in the ’393 patent
`
`specification.
`
`18. The process disclosed in Examples 1-5 is set forth below with graphics
`
`taken from the patent:
`
`
`
`6
`
`

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`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 8 of 52 PageID: 341
`Case 3:l4—cv—05499—PGS—LHG Document 41-3 Filed 07/07/15 Page 8 of 52 Page|D: 341
`
`
`Emunplc 3
`
`Conversion ofTrcprost1'JJJ'J to Tmpmstiuil
`Diethannlanline Salt (1:1)
`
`
`
`,i'
`H— N1.
`
`
`[I] EJDH, Etflfin:
`[TI]: H::'pfs.r.: Slunjr
`
`‘K,
`OH
`
`
`
`OH
`
`Exsm1p1c 4
`
`.‘.::I:r: Filu n'~' of Ta:
`
`:-.'-sI[I:i| !'JEc1|'.;nn[nIni:u~ !‘~.~nEr r1:1fi
`
`Nu:u.c
`
`Bal:5I1\'-::u.
`
`.='|.::u:rJ1'.‘.
`
`Ratio
`
`1':r:_:m'Jsti1Li|
`D:v:lEIrLI;o|an1:I;~: Salt
`I-In:_:«L'-_n:
`’J':r:;mstiui|
`DIEeI_FmI'_-:.|amEI:~e S.:[t
`%[L"_::-Ir-.n::
`
`1
`
`—
`2
`
`—
`
`31-53 g
`
`315 L
`3071 g
`
`sum L
`
`1
`
`E:
`1
`
`E2
`
`
`
`7
`
`

`
`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 9 of 52 PageID: 342
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`
`(Ex. 2, Col. 9:25-14:65).
`
`
`
`19. The ’393 specification describes the benefits of the disclosed process as
`
`follows:
`
`The quality of treprostinil produced according to this invention
`is excellent. The purification of benzindene nitrile by column
`chromatography is eliminated. The impurities carried over from
`intermediate steps (i.e. alkylation of triol and hydrolysis of
`benzindene nitrile) are removed during the carbon treatment
`and the salt formation step. Additional advantages of this
`process are: (a) crude treprostinil salts can be stored as raw
`material at ambient temperature and can be converted to
`treprostinil by simple acidification with diluted hydrochloric
`
`8
`
`

`
`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 10 of 52 PageID: 343
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`
`acid, and (b) the treprostinil salts can be synthesized from the
`solution of treprostinil without isolation. This process provides
`better quality of final product as well as saves significant
`amount of solvents and manpower in purification of
`intermediates.
`
`(Ex. 2, Col. 17:27-40).
`
`20.
`
`It is my understanding that the claims at issue in this case are “product by
`
`process” claims, which I am informed means that they cover the recited product
`
`made by a process that includes the recited process steps.
`
`II. LEGAL STANDARDS
`21.
`
`I understand that claim construction is the process by which the Court
`
`determines the meaning and scope of the terms in a claim.
`
`22.
`
`I understand that, in general, claims are construed to have their plain and
`
`ordinary meaning as understood by a person of ordinary skill in the art as of the
`
`filing date of the patent. It is also my understanding that claim terms should be
`
`construed in a manner that is consistent with the language of the claims and the
`
`disclosure in the specification.
`
`23. For the purposes of my analysis, I assumed that the filing date of the ’393
`
`patent was December 17, 2007.
`
`24.
`
`I understand that the prosecution history of a patent is the record of the
`
`communications between the Applicant and the Patent Office that led to the
`
`issuance of the patent. It is also my understanding that claim terms should
`
`9
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`

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`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 11 of 52 PageID: 344
`
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`generally be construed in a manner that is consistent with the statements made to
`
`the Patent Office during prosecution.
`
`25.
`
`It is my understanding that inventors may define terms in the
`
`specification in a way that is not consistent with the plain and ordinary meaning of
`
`the term; in other words, is entitled to be his own lexicographer. It is my
`
`understanding that in such cases, the claim term should be construed to have the
`
`definition set forth in the specification.
`
`26.
`
`In my analysis, I relied upon the standards as set forth above in addition
`
`to my 50 years of experience in the field of organic chemistry.
`
`27.
`
`I have reviewed the claims, specification, and prosecution history of the
`
`’393 patent. I have also reviewed the parties’ Joint Claim Construction and
`
`Prehearing Statement.
`
`III. LEVEL OF ORDINARY SKILL
`28. A person of ordinary skill in the art would have a Ph.D. in organic or
`
`medicinal chemistry and at least a few years of experience in medicinal chemistry,
`
`including in the development of potential drug candidates. A person of ordinary
`
`skill in the art would also include a person who has a Bachelor’s or Master’s
`
`degree in organic chemistry or medicinal chemistry if such a person had more
`
`years of experience in medicinal chemistry and the development of potential drug
`
`candidates.
`
`10
`
`

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`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 12 of 52 PageID: 345
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`
`IV. DISCUSSION
`29. As I explained above, the ’393 patent teaches a method of preparing a
`
`genus of compounds including treprostinil and its salts. The claims of the ’393
`
`patent are drawn to products that contain, for example, treprostinil and its salts
`
`made through a process that includes three steps (a)-(c) followed by an optional
`
`fourth step. In this section, I will explain the chemistry underlying each of these
`
`steps in greater detail.
`
`A.
`Step (a): The Alkylation Step
`30. Step (a) is the alkylation step. Example 1 of the ’393 patent describes an
`
`alkylation reaction, as shown below:
`
`
`
`11
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`

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`31. As is shown above, in Example 1, alkylation, or an alkylation reaction or
`
`alkylation step, refers to the addition of an “alkyl” group. An alkyl group is
`
`hydrocarbon consisting of the general formula CnH2n +1, and is derived from an
`
`alkane group by removal of a hydrogen.
`
`32.
`
`In organic chemistry, the simplest compounds are those that are made up
`
`of carbon and hydrogen, called hydrocarbons, in which the carbon atoms are joined
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`12
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`

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`by single bonds. Such compounds are known as alkanes. Removal of a hydrogen
`
`from one of the carbon atoms of an alkane creates an “alkyl” group, which can
`
`bind to other groups. In other words, an alkyl group is one or more carbon atoms
`
`that are connected by single bonds.
`
`
`
`33. A “nitrile” is a substituent in which a carbon is bonded to a single
`
`nitrogen through a triple bond. It is often depicted in chemistry as “CN,” as is used
`
`in the ’393 patent claims and in the specification (see above, Example 1).
`
`34. An alkyl group can be “simple,” such as the C4H9 example illustrated in
`
`¶32 above, or it can obtain additional substituents. Examples of “simple” and
`
`“substituted” alkyl groups are methyl and cyanomethyl, illustrated below:
`
`
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`13
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`

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`35. As discussed below, the alkylation reaction claimed in the ’393 patent is
`
`limited to a sub-class of alkylation reactions, in which the alkylating agent is a
`
`cyanoalkyl group.
`
`B.
`Step (b): The Hydrolysis Step
`36. Step (b) is the hydrolysis step, in which the benzindene nitrile
`
`intermediate formed in step (a) reacts with water in the presence of a strong base to
`
`produce treprostinil acid. Hydrolysis reactions are those in which water “lyses” –
`
`i.e. cuts – the bonds in a molecule. Hence the term hydro (water) –lysis (cuts).
`
`37. When a strong base, such as potassium hydroxide (KOH), is added to an
`
`aqueous solution containing the benzindene nitrile, potassium hydroxide
`
`dissociates (or splits) into a positively charged potassium cation (K+) and a
`
`negatively charged hydroxide ion (OH–).
`
`38. Hydroxide ions are known to cause hydrolysis reactions of nitrile groups.
`
`This means that hydroxide ions (OH–) cause water to react with nitrile groups (CN)
`
`to form the corresponding carboxylic acid (COOH).
`
`39.
`
`In the case of the ’393 patent, the benzindene nitrile reacts with water
`
`under the influence of a base such as NaOH or KOH to form treprostinil acid as
`
`shown in Example 2 of the ’393 specification:
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`14
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`
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`C.
`Step (c): The Salt Formation Step
`40. Step (c) in the ’393 patent process is a salt formation step.
`
`41.
`
`In general, a salt is an ionic species consisting of a positively charged
`
`moiety called a “cation” with a negatively charged moiety called an “anion.”
`
`42. For example, the chemical formula for table salt, or sodium chloride, is
`
`NaCl. The cation in table salt is the sodium ion, or Na+. The anion is the chloride
`
`ion, or Cl–. In the solid form, the Na+ and Cl– ions exist in a lattice wherein each
`
`Na+ is surrounded by six Cl– ions and vice versa:
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`15
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`When dissolved in water, the sodium ions and the chloride ions separate from the
`
`crystal lattice and exist in solution as Na+ cations and Cl– anions.
`
`43. The most common method of forming a salt is through the reaction of an
`
`acid with a base, which is called an “acid-base reaction.” In step (c) of the ’393
`
`patent process, a salt is formed by reacting an acid with a base.
`
`44.
`
`In chemistry, there are different types of bases. The salt formation step
`
`that is described in the ’393 patent involves use of a particular type of base.
`
`45. Acid-base reactions typically take place in a solvent such as water, or as
`
`chemists would say, “in solution.” The particulars of acid-base reactions are more
`
`readily understood in the context of how water behaves on a chemical level.
`
`46. Water can exist as the whole molecule H2O or in dissociated form as a
`
`balance of H+ and OH– ions. The H+ ions are hydrogen ions, which is simply a
`
`proton.2 The OH– ions are called hydroxide ions.
`
`
`2 Although it is convenient to depict the species resulting from dissociation of water
`as a proton and a hydroxide ion, bare protons do not exist in solution; rather, the
`proton is bonded to a neutral water molecule to give a species called a hydronium
`ion, H3O+:
`
`16
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`

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`47.
`
`In any given sample of water, the bonds between hydroxide ions and
`
`hydrogen ions are constantly breaking and reforming. This means that at any
`
`given point in time, a sample of water contains H2O molecules as well as
`
`dissociated hydrogen ions and hydroxide ions. In pure water one-ten millionth
`
`(10–7) of the water molecules are dissociated at any given time, as shown in the
`
`following equation:
`
`
`When a sample of water has an equal number of H+ and OH– ions it is said to be
`
`“neutral”. If there are more H+ than OH– ions it is said to be “acidic” and if there
`
`are more OH– than H+ ions it is said to be “basic.”
`
`48. A base is a chemical compound that alters the balance of hydrogen ions
`
`and hydroxide ions in water or aqueous solution so that there are fewer hydrogen
`
`ions than hydroxide ions. A base can accomplish this in two related but slightly
`
`different ways:
`
`a. Bases like NaOH and KOH dissolve and dissociate to contribute
`additional OH– ions to the solution.
`
`
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`17
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`b. Bases like NH3 react with some of the H+ ions, leaving an excess of
`OH– ions.
`
`
`49. The base used in the hydrolysis step of Example 2, as described above, is
`
`potassium hydroxide (KOH). As shown in the preceding paragraph potassium
`
`hydroxide dissociates to form K+ and OH– ions. The greater concentration of OH–
`
`causes the hydrolysis reaction that converts the CN group to COOH.3
`
`50.
`
`In contrast, the base used in the salt formation step of the ’393 patent
`
`“accepts” hydrogen ions, giving a salt in which the cation is an ammonium ion, as
`
`illustrated in ¶48b.
`
`51. Example 3 provides an embodiment of this step. In example 3, the base
`
`used is diethanolamine, and the salt formed is treprostinil diethanolamine salt. In
`
`Example 3, the acid (treprostinil acid)—forms an anion by giving up – “donating”
`
`– its hydrogen atom. The carboxylic acid anion produced in this reaction is a
`
`“carboxylate” ion and for convenience it will be referred to in this report as
`
`“(treprostinil)– ”.
`
`
`3 Strictly speaking, the hydrolysis reaction converts the CN group to CO2
`–, giving
`treprostinil carboxylate. Treprostinil acid is produced in the workup of the
`hydrolysis reaction described in Example 2, when the aqueous solution obtained by
`the reaction of the benzindene nitrile with KOH and water is acidified by the
`addition of 3M HCl (col. 11:12-16). This is a second chemical reaction that is
`considered to be a part of “step (b).”
`
`18
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`

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`52. The base used in Example 3 is diethanolamine, which is a hydrogen ion
`
`acceptor. When combined with treprostinil, diethanolamine “accepts” a hydrogen
`
`ion from treprostinil acid and thereby forms a cation which is called the
`
`
`
`diethanolammonium ion.
`
`53.
`
`(Treprostinil)– is also called the “conjugate base” of treprostinil acid, and
`
`the diethanolammomium ion is the “conjugate acid” of diethanolamine.
`
`D. Chemical reactions versus physical manipulation
`54. Steps (a) through (c) described above are chemical reactions. The
`
`examples also describe physical separation and purification steps that follow the
`
`chemical reactions and produce the final product.
`
`19
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`

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`55. Chemical steps are those in which chemical bonds are broken or
`
`exchanged and new molecules form. Physical steps, by contrast, rely on the
`
`physical properties of compounds to separate them from each other.
`
`56. Purification can be accomplished using a variety of different methods.
`
`Some of them are chemical; others are physical. Examples of physical purification
`
`methods are filtration, drying and recrystallization.
`
`57. Filtration is a method of separating a solid material from admixed liquids
`
`by passing the mixture through a porous membrane, such as “filter paper.” The
`
`liquid passes through the membrane while the admixed solids are retained.
`
`58. Drying is a means of separating the desired product from water or other
`
`solvent through simple heating, sometimes under reduced pressure (vacuum). In
`
`this process, heating causes water and/or other volatile materials to evaporate,
`
`leaving the desired product.
`
`59. Recrystallization is a process in which an impure or semipure crystalline
`
`material is taken into solution and allowed to slowly crystallize while the
`
`temperature is reduced or the solvent is allowed to gradually evaporate. This
`
`process generally results in increased purity of the recrystallized material.
`
`20
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`

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`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 22 of 52 PageID: 355
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`
`V.
`
`PRIOR ART
`60.
`
`It is my understanding that the general facts surrounding the early
`
`development and commercialization of treprostinil have been addressed in prior
`
`litigation.
`
`61.
`
`It is further my understanding that UTC hired Dr. Robert Moriarty to
`
`develop a new commercial manufacturing process for treprostinil. That process
`
`was disclosed in U.S. Patent No. 6,765,117 (the “’117 patent”), as well as other
`
`publications, including Moriarty et al., “The Intramolecular Assymetric Pauson-
`
`Khand Cyclization as a Novel and General Stereoselective Route to Benzindene
`
`Prostacyclins: Synthesis of UT-15 (Treprostinil),” 69 J. Org. Chem. 1890-1902
`
`(2004) (“Moriarty 2004”).
`
`62. Like the ’393 process, the process described in the ’117 patent and
`
`Moriarty 2004 includes the steps of alkylating a benzindene triol to form a
`
`benzindene nitrile and hydrolyzing the benzindene nitrile with a base to form
`
`treprostinil acid. Moriarty 2004 discloses an example in which the treprostinil
`
`obtained through the described method was 99.7% pure.
`
`63. Other references in the prior art also describe processes for making
`
`treprostinil and treprostinil salts. For example, the article “Synthetic Approaches
`
`To The 2002 New Drugs” by Jin Li and Kevin K.-C. Liu (Mini-Reviews in
`
`21
`
`

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`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 23 of 52 PageID: 356
`
`
`Medicinal Chemistry, Vol. 4 at pp. 207-233 (2004) (“Li”)) describes the synthesis
`
`of twenty-two drugs brought to market in 2002, including treprostinil.
`
`64. The Li article discloses a process of making treprostinil that involves
`
`alkylating the benzindene triol (compound 226) to obtain a nitrile intermediate
`
`(compound 227), hydrolyzing the nitrile with a base to form treprostinil acid
`
`(compound 228), and then contacting the treprostinil acid with a base (NaOH) to
`
`form treprostinil sodium salt (compound 26), as shown below:
`
`(Li at p. 229).
`
`VI. DISPUTED TERMS
`65.
`
`I have reviewed the parties’ proposed constructions for each disputed
`
`
`
`term and discuss each in turn.
`
`22
`
`

`
`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 24 of 52 PageID: 357
`
`
`A. Term 1 (claims 1 and 9): “product”
`
`“product”
`
`Sandoz’s Construction
`“A chemical composition.”
`
`UTC’s Construction
`Plain and ordinary meaning.
`To the extent the Court determines that
`this term requires construction, UTC
`proposes the following:
`“a substance resulting from a chemical
`reaction”
`
`
`
`66. Both claims 1 and 9 are directed to “a product comprising a
`
`compound….” I have been informed by counsel that in the context of patent law,
`
`the term “comprising” when used in a patent claim means “including but not
`
`limited to.”
`
`67. This is in agreement with the way the inventors defined the term
`
`“comprising” in the specification:
`
`The expression “comprising” means “including but not limited to.”
`Thus, other non-mentioned substances, additives, carriers, or steps
`may be present.
`
`(Ex. 2, Col. 4:23-24).
`
`68. Therefore, the term “product” as it is used in claims 1 and 9 of the ’393
`
`patent is not restricted to the depicted compound but can include other compounds.
`
`In my opinion, a person of ordinary skill in the art would understand that the term
`
`“product” as it is used in claims 1 and 9 of the ’393 patent refers to a chemical
`
`composition.
`
`23
`
`

`
`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 25 of 52 PageID: 358
`
`
`69.
`
`In particular, a person of ordinary skill in the art would understand that
`
`UTC’s proposed construction is not consistent with the plain and ordinary meaning
`
`of “product” as read in the context of the claim language as defined by the
`
`teachings in the specification.
`
`70. UTC’s construction requires that the claimed product is the substance
`
`resulting from a chemical reaction.
`
`71. Under UTC’s proposed construction, it is unclear whether the claimed
`
`“product” would include substances resulting from non-chemical reactions, such as
`
`physical separation, purification, or drying steps, or additional steps for
`
`formulating a finished drug product. As a result, UTC’s proposed construction is
`
`not consistent with what I understand to be the open-ended language of the process
`
`term in the claims (“a process comprising”), which does not limit the process to
`
`chemical reactions. Nor is it consistent with the teachings in the specification of
`
`the ’393 patent, which disclose processes for making treprostinil that include
`
`additional steps following the final chemical reaction.
`
`72. Example 6, which describes a “Working Example of the Process
`
`According to the Present Invention” (Ex. 2, Col. 15:2-5), includes numerous
`
`separate process steps that culminate in the production of treprostinil. (Id., Col.
`
`15:1-17:25). However, the final chemical reaction described in this process is the
`
`conversion of treprostinil diethanolamine salt into treprostinil acid by reaction with
`
`24
`
`

`
`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 26 of 52 PageID: 359
`
`
`HCl (step 35). All of the subsequent steps are process steps designed to purify the
`
`final product, and these include extraction, a water wash, a brine wash, filtration,
`
`evaporation, crude drying, crystallization, an additional filtration step, washing,
`
`and drying in a vacuum oven.
`
`73.
`
`It is only after all of these process steps are complete that the purity of
`
`the “product” is calculated.
`
`74. Example 5 also describes several steps that take place following the final
`
`chemical reaction, and these include physical separation steps, washing, brining,
`
`drying, filtration, concentration under vacuum, recrystallization of the crude
`
`treprostinil, further filtration, washing, drying and drying in a vacuum oven. (Ex.
`
`2, Col. 14:1-54).
`
`75. Similarly, in Example 3, treprostinil diethanolamine salt—after it has
`
`formed chemically—undergoes non-chemical steps: filtration, washing, air-drying,
`
`and vacuum-drying. (Id., Col. 12:46-52).
`
`76. Thus, the ’393 patent makes clear that the “product” is not limited to a
`
`substance that results from a chemical reaction. The “product” can result from
`
`chemical reactions along with any other type of process step, whether it is
`
`filtration, washing, evaporation, or recrystallization.
`
`25
`
`

`
`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 27 of 52 PageID: 360
`
`
`B.
`
`Term 2 (claim 1) and term 12 (claim 9): “a product comprising a
`compound of formula I or a pharmaceutically acceptable salt
`thereof” and “a product comprising a compound of formula IV or
`a pharmaceutically acceptable salt thereof.”
`
`Term 2 (claim 1)
` “a product comprising a compound of formula I:
`
`
` or a pharmaceutically acceptable salt thereof”
`UTC’s Construction
`Sandoz’s Construction
`“A chemical composition that includes,
`Plain and ordinary meaning.
`but is not limited to, a compound of
`To the extent the Court determines that
`formula I, or a pharmaceutically
`this term requires construction, UTC
`acceptable salt thereof, and that may
`proposes the following:
`also include other non-mentioned
`“a substance resulting from a chemical
`substances (including impurities),
`reaction constituted primarily of formula
`additives, or carriers, without limitation
`I
`as to the types or relative amounts
`thereof”
`
`
`
`or a pharmaceutically acceptable salt
`thereof”
`
`Term 12 (claim 9)
` “a product comprising a compound of formula IV
`
`
` or a pharmaceutically acceptable salt thereof”
`
`26
`
`

`
`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 28 of 52 PageID: 361
`
`
`Plain and ordinary meaning.
`To the extent the Court determines that
`this term requires construction, UTC
`proposes the following:
`“a substance resulting from a chemical
`reaction constituted primarily of formula
`IV
`
`“A chemical composition that includes,
`but is not limited to, a compound of
`formula IV, or a pharmaceutically
`acceptable salt thereof, and that may
`also include other non-mentioned
`substances (including impurities),
`additives, or carriers, without limitation
`as to the types or relative amounts
`thereof”
`
`
`or a pharmaceutically acceptable salt
`thereof”
`
`
`77. As I explained above, I have been informed by counsel that the term
`
`“comprising” means “including but not limited to” in the context of patent claims,
`
`and it is further my understanding that the ’393 patent specification defines
`
`“comprising” to mean “including but not limited to.”
`
`78. As a result, the person of ordinary skill in the art would understand that
`
`terms 2 and 12, as depicted above, refer to a chemical composition that includes
`
`the recited chemical compound but that may also include other substances, without
`
`limitation as to the types or relative amounts thereof. Such other substances could
`
`include impurities, additives or carriers, as is stated in the ’393 patent specification.
`
`(Ex. 2, Col. 4:23-24).
`
`27
`
`

`
`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 29 of 52 PageID: 362
`
`
`79. Thus, in my opinion, Sandoz’s proposed construction is consistent with
`
`the understanding of a person of ordinary skill in the art based on the context of the
`
`’393 patent.
`
`80. UTC’s construction is not consistent with the language of the claims as
`
`understood by the person of ordinary skill in the art. As I explained above, the
`
`term “product” should not be limited to the product of a chemical reaction. Also,
`
`as I have been informed by counsel that in the context of patent law, the term
`
`“comprising” means “including but not limited to,” and in view of the definition
`
`provided in the specification, the claimed product does not need to consist
`
`“primarily” of the depicted compound.
`
`C. Terms 3 and 13: “a process comprising”
`
`Term 3 (claim 1)
`“a process comprising”
`UTC’s Construction
`Sandoz’s Construction
`Plain and ordinary meaning.
`“A process that includes, but is not
`limited to, the recited process steps, and
`
`may include, without limitation, any
`other non-recited steps.”
`Term 13 (claim 9)
`“the process comprising”
`“The process that includes, but is not
`limited to, the recited process steps, and
`may include, without limitation, any
`other non-recited steps.”
`
`Plain and ordinary meaning.
`
`
`
`
`28
`
`

`
`Case 3:14-cv-05499-PGS-LHG Document 41-3 Filed 07/07/15 Page 30 of 52 PageID: 363
`
`
`81. As explained above, the person of ordinary skill in the art would
`
`understand that the term “comprising” means “including but not limited to”. Also,
`
`as explained above, the ’393 patent specification defines “comprising” as
`
`“including but not limited to” and explains that “other non-mentioned…steps may
`
`be present.” (Ex. 2, Col. 4:23-24). Thus, a person of ordinary skill in the art
`
`would understand that the term “a process comprising” refers to a process that
`
`includes the three steps recited in the claim but may also include other, non-
`
`mentioned steps. Such steps could include purification steps or formulation steps.
`
`82. Because the specification places no limits on what other, non-recited
`
`steps may be present, “a process comprising” is best understood as “a process that
`
`includes, but is not limited to, the recited process steps, and may include, without

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